SMTL ID : 8aqu.1

BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: N.69, T.71, E.73, N.74, K.77, R.356 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.73

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain B: F.335, D.336, N.340, L.368 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.368 Hydrogen bonds: B:D.336, B:D.336

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, D. et al., Cryo-EM structures and binding of mouse and human ACE2 to SARS-CoV-2 variants of concern indicate that mutations enabling immune escape could expand host range. Plos Pathog. (2023)

Release Date

2023-03-01

Peptides

Processed angiotensin-converting enzyme 2,Ig gamma-2A chain C region, membrane-bound form: A
Spike glycoprotein,Fibritin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Processed angiotensin-converting enzyme 2,Ig gamma-2A chain C region, membrane-bound form

Spike glycoprotein,Fibritin

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