SMTL ID : 8ati.2 (2 other biounits)

Human CtBP2(31-364) in complex with RAI2 peptide(315-322)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 26 residues within 4Å: Chain A: S.95, G.96, T.123, I.175, G.176, G.178, R.179, T.180, Y.198, D.199, P.200, Y.201, L.202, H.231, C.232, N.233, N.235, N.238, A.259, A.260, R.261, D.285, V.286, H.310, A.312, W.313 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:T.123, A:W.313 Hydrogen bonds: A:G.178, A:R.179, A:T.180, A:N.233, A:N.235, A:N.238, A:R.261, A:D.285, A:D.285, A:W.313 Water bridges: A:Y.97, A:T.180, A:G.181, A:Y.201, A:Y.201, A:L.234, A:L.234, A:R.261 Salt bridges: A:R.179 pi-Stacking: A:Y.201 NAD.2: 26 residues within 4Å: Chain C: S.95, G.96, T.123, I.175, G.176, G.178, R.179, T.180, Y.198, D.199, P.200, Y.201, L.202, H.231, C.232, N.233, N.235, N.238, A.259, A.260, R.261, D.285, V.286, H.310, A.312, W.313 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:T.123, C:W.313 Hydrogen bonds: C:G.178, C:R.179, C:T.180, C:N.233, C:N.235, C:N.238, C:R.261, C:D.285, C:W.313 Water bridges: C:Y.97, C:G.181, C:L.234, C:L.234, C:H.237, C:R.261 Salt bridges: C:R.179 pi-Stacking: C:Y.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goradia, N. et al., Human CtBP2(31-364) in complex with RAI2 peptide(315-322). To Be Published

Release Date

2023-08-23

Peptides

Isoform 2 of C-terminal-binding protein 2: AC
Retinoic acid-induced protein 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
B

B
b

D
b

Isoform 2 of C-terminal-binding protein 2

Retinoic acid-induced protein 2

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