SMTL ID : 8ati.3 (2 other biounits)

Human CtBP2(31-364) in complex with RAI2 peptide(315-322)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-1-mer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: S.95, G.96, I.175, G.176, G.178, R.179, T.180, Y.198, D.199, P.200, Y.201, L.202, H.231, C.232, N.233, N.235, N.238, A.259, A.260, R.261, D.285, V.286, H.310, A.312, W.313 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:S.95, A:R.179, A:R.179, A:T.180, A:N.233, A:N.235, A:N.238, A:D.285, A:D.285, A:W.313 Water bridges: A:G.178, A:G.181, A:Y.201, A:Y.201 Salt bridges: A:R.179 pi-Stacking: A:Y.201 NAD.2: 24 residues within 4Å: Chain B: S.95, G.96, T.123, I.175, G.176, G.178, R.179, T.180, Y.198, D.199, P.200, Y.201, H.231, C.232, N.233, N.235, N.238, A.259, A.260, D.285, V.286, H.310, A.312, W.313 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:W.313 Hydrogen bonds: B:S.95, B:G.178, B:R.179, B:T.180, B:Y.201, B:C.232, B:N.233, B:N.235, B:N.238, B:D.285, B:D.285, B:A.312, B:W.313 Water bridges: B:Y.201, B:H.237 Salt bridges: B:R.179, B:R.179

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 2 residues within 4Å: Chain B: P.303, N.304 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.304 Water bridges: B:W.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goradia, N. et al., Human CtBP2(31-364) in complex with RAI2 peptide(315-322). To Be Published

Release Date

2023-08-23

Peptides

Isoform 2 of C-terminal-binding protein 2: AB
Retinoic acid-induced protein 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
c

Isoform 2 of C-terminal-binding protein 2

Retinoic acid-induced protein 2

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