SMTL ID : 8av9.1

INDUCED MYELOID LEUKEMIA CELL DIFFERENTIATION PROTEIN FABCOMPLEX IN COMPLEX WITH COMPOUND 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x VF8: (3R,6R,7S,8E,11S,12R,22S)-6'-chloro-7-methoxy-11,12-dimethyl-13,13-dioxo-spiro[20-oxa-13-gamma6-thia-1,14-diazatetracyclo[14.7.2.03,6.019,24]pentacosa-8,16(25),17,19(24)-tetraene-22,1'-tetralin]-15-one(Non-covalent)

VF8.1: 16 residues within 4Å: Chain A: H.59, A.62, M.66, L.70, V.84, M.85, V.88, F.89, G.97, R.98, T.101, L.102, F.105, G.106, V.109, L.125 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:M.66, A:L.70, A:V.84, A:M.85, A:V.88, A:F.89, A:T.101, A:L.102, A:F.105, A:F.105 Hydrogen bonds: A:T.101, A:T.101 Water bridges: A:N.95 pi-Stacking: A:F.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hargreaves, D. et al., Design of rigid protein-protein interaction inhibitors enables targeting of undruggable Mcl-1. Proc.Natl.Acad.Sci.USA (2023)

Release Date

2023-05-24

Peptides

Induced myeloid leukemia cell differentiation protein Mcl-1: A
Fab Heavy Chain: B
Fab Light Chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Induced myeloid leukemia cell differentiation protein Mcl-1

Fab Heavy Chain

Fab Light Chain

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