- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.4: 5 residues within 4Å:- Chain A: P.214, S.216, N.261, T.264, E.268
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.261
NAG.6: 5 residues within 4Å:- Chain A: N.198, A.225, T.228, W.229, V.378
1 PLIP interactions:1 interactions with chain A- Water bridges: A:N.198
NAG.9: 2 residues within 4Å:- Chain A: N.49, R.296
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.49, A:R.296, A:T.315
NAG.10: 5 residues within 4Å:- Chain A: Q.362, N.486, T.488, N.501, N.503
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.362, A:N.501
- Water bridges: A:T.488
NAG.12: 4 residues within 4Å:- Chain B: P.214, N.261, T.264, E.268
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.261
NAG.14: 4 residues within 4Å:- Chain B: N.198, A.225, T.228, W.229
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:T.228, B:W.229
- Hydrogen bonds: B:N.198, B:W.229, B:W.229
NAG.17: 2 residues within 4Å:- Chain B: N.49, R.296
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.49
NAG.18: 4 residues within 4Å:- Chain B: Q.362, N.486, T.488, N.501
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:T.488
- Hydrogen bonds: B:Q.362, B:N.501
- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.5: 6 residues within 4Å:- Chain A: M.39, S.42, S.43, D.281, P.282, L.284
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:M.39, A:S.42
PEG.7: 5 residues within 4Å:- Chain A: S.382, A.383, G.468, Y.469, N.470
1 PLIP interactions:1 interactions with chain A- Water bridges: A:Y.469
PEG.13: 7 residues within 4Å:- Chain B: M.39, S.42, S.43, L.279, A.280, P.282
- Ligands: NAG-NAG-MAN.1
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:M.39
- Water bridges: B:S.43
PEG.15: 5 residues within 4Å:- Chain B: S.382, A.383, G.468, Y.469, N.470
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.466
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 8 residues within 4Å:- Chain A: D.101, A.102, Y.149, P.408, T.409, M.450, F.454, Y.460
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.409
- Water bridges: A:Q.381
GOL.16: 9 residues within 4Å:- Chain B: D.101, A.102, Y.149, Q.381, T.409, M.450, G.452, Y.453, Y.460
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.101, B:Y.149, B:Q.381, B:Y.453, B:Y.453
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tjallinks, G. et al., Structure elucidation and characterization of patulin synthase, insights into the formation of a fungal mycotoxin. Febs J. (2023)
- Release Date
- 2023-09-06
- Peptides
- Patulin synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tjallinks, G. et al., Structure elucidation and characterization of patulin synthase, insights into the formation of a fungal mycotoxin. Febs J. (2023)
- Release Date
- 2023-09-06
- Peptides
- Patulin synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D