SMTL ID : 8c3u.1 (1 other biounit)

Crystal Structure of human IL-1beta in complex with a low molecular weight antagonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x T9C: (S)-4'-hydroxy-3'-(6-methyl-2-oxo-3-(1H-pyrazol-4-yl)indolin-3-yl)-[1,1'-biphenyl]-2,4-dicarboxylic acid(Non-covalent)

T9C.1: 14 residues within 4Å: Chain A: V.3, S.45, F.46, V.47, E.50, P.57, K.92, K.93, K.94, M.95, K.97, V.100, N.102, A.115 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.3, A:V.47, A:P.57, A:K.97, A:V.100, A:A.115 Hydrogen bonds: A:E.50, A:K.93, A:M.95, A:N.102 Water bridges: A:K.55, A:K.97, A:K.97 Salt bridges: A:K.55, A:K.94, A:K.97, A:K.97 pi-Cation interactions: A:K.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hommel, U. et al., Discovery of a selective and biologically active low-molecular weight antagonist of human interleukin-1 beta. Nat Commun (2023)

Release Date

2023-09-13

Peptides

Interleukin-1 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interleukin-1 beta

Related Entries With Identical Sequence