SMTL ID : 8cc5.2 (1 other biounit)

Vibrio cholerae GbpA (LPMO domain)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

monomer

Ligands

1 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: H.1, H.98, F.170 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.1, A:H.98

3 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: D.47, K.101, D.162 Ligands: NA.5 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.47, A:D.47, A:D.162, A:D.162, H2O.3 ZN.3: 1 residues within 4Å: Chain A: D.124 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.124, H2O.2 ZN.4: 1 residues within 4Å: Chain A: Q.116 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 6 residues within 4Å: Chain A: D.47, D.162, V.163, T.166, A.168 Ligands: ZN.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.166, A:A.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sorensen, H.V. et al., Perdeuterated GbpA Enables Neutron Scattering Experiments of a Lytic Polysaccharide Monooxygenase. Acs Omega (2023)

Release Date

2023-08-30

Peptides

GlcNAc-binding protein A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

GlcNAc-binding protein A

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