SMTL ID : 8cnc.1

Structure of compound 1 bound KMT9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 6D6: 5'-{[(3S)-3-amino-3-carboxypropyl](3-aminopropyl)amino}-5'-deoxyadenosine(Non-covalent)

6D6.1: 21 residues within 4Å: Chain A: Y.12, D.17, T.18, E.40, G.42, S.43, G.44, V.48, D.66, I.67, N.68, T.91, D.92, L.93, N.111, P.112, P.113, Y.114, A.129, A.130, R.143 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.42, A:G.42, A:G.44, A:I.67, A:D.92, A:D.92, A:L.93, A:N.111, A:N.111, A:R.143 Water bridges: A:D.10, A:G.46, A:N.68, A:Y.114, A:A.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sheng, W. et al., Structure of compound 1 bound KMT9. To Be Published

Release Date

2024-03-06

Peptides

Methyltransferase N6AMT1: A
Multifunctional methyltransferase subunit TRM112-like protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Methyltransferase N6AMT1

Multifunctional methyltransferase subunit TRM112-like protein

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