SMTL ID : 8cx3.2 (5 other biounits)

Crystal structure of full-length mesothelin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.61 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: Q.68, K.92, N.94, R.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.92

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: F.229, M.230, L.232, T.234 Ligands: GOL.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.232, A:T.234, A:T.234 PO4.3: 5 residues within 4Å: Chain A: Y.80, V.107, N.108, K.109, H.111 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.80, A:K.109, A:K.109 Salt bridges: A:H.111

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 2 residues within 4Å: Chain A: M.230 Ligands: PO4.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhan, J. et al., Structures of Cancer Antigen Mesothelin and Its Complexes with Therapeutic Antibodies. Cancer Res Commun (2023)

Release Date

2023-02-01

Peptides

Isoform 4 of Mesothelin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Isoform 4 of Mesothelin

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