- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 1 x ZGS: [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoate(Non-covalent)
- 16 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.2: 4 residues within 4Å:- Chain A: Q.134, G.135, V.138
- Ligands: LMT.7
Ligand excluded by PLIPLMT.3: 10 residues within 4Å:- Chain A: I.189, A.192, I.193, Q.196, I.197, M.200
- Ligands: LMT.4, LMT.13, LMT.14, LMT.16
Ligand excluded by PLIPLMT.4: 10 residues within 4Å:- Chain A: I.193, I.197, M.200, A.201, D.234, N.237, I.241, V.245
- Ligands: LMT.3, LMT.5
Ligand excluded by PLIPLMT.5: 9 residues within 4Å:- Chain A: Q.233, N.237, M.240, I.241, G.244, V.245
- Chain B: A.65
- Ligands: LMT.4, LMT.6
Ligand excluded by PLIPLMT.6: 5 residues within 4Å:- Chain A: F.124, Y.128, G.244
- Ligands: LMT.5, LMT.7
Ligand excluded by PLIPLMT.7: 10 residues within 4Å:- Chain A: L.121, F.124, Y.128, P.130, S.131, V.132, D.133, W.139
- Ligands: LMT.2, LMT.6
Ligand excluded by PLIPLMT.8: 8 residues within 4Å:- Chain A: G.460, E.461, L.464, I.468, A.472
- Chain C: F.51, G.53
- Ligands: LMT.9
Ligand excluded by PLIPLMT.9: 3 residues within 4Å:- Chain A: L.464, S.471
- Ligands: LMT.8
Ligand excluded by PLIPLMT.10: 8 residues within 4Å:- Chain A: C.37, S.38, C.41, V.252, V.256, L.259, G.260, K.262
Ligand excluded by PLIPLMT.11: 6 residues within 4Å:- Chain A: P.101, W.102, W.111, L.114, F.118
- Ligands: LMT.12
Ligand excluded by PLIPLMT.12: 5 residues within 4Å:- Chain A: R.99, P.101, W.111, T.149
- Ligands: LMT.11
Ligand excluded by PLIPLMT.13: 9 residues within 4Å:- Chain A: L.40, A.47, S.174, Y.178, T.181, V.182, L.185, I.189
- Ligands: LMT.3
Ligand excluded by PLIPLMT.14: 6 residues within 4Å:- Chain A: C.37, C.41, I.44, V.252, V.256
- Ligands: LMT.3
Ligand excluded by PLIPLMT.15: 2 residues within 4Å:- Chain A: V.441, F.448
Ligand excluded by PLIPLMT.16: 9 residues within 4Å:- Chain A: L.188, I.189, A.192, Q.196, D.324, N.327, L.330, Y.381
- Ligands: LMT.3
Ligand excluded by PLIPLMT.18: 10 residues within 4Å:- Chain A: D.71, F.73, Y.74, I.77, V.81
- Chain B: Y.48, K.54
- Chain C: L.97, F.102, P.104
Ligand excluded by PLIP- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nguyen, C. et al., Lipid flipping in the omega-3 fatty-acid transporter. Nat Commun (2023)
- Release Date
- 2023-05-10
- Peptides
- Sodium-dependent lysophosphatidylcholine symporter 1-B: A
FAB light chain: B
FAB heavy chain: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 1 x ZGS: [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoate(Non-covalent)
- 16 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nguyen, C. et al., Lipid flipping in the omega-3 fatty-acid transporter. Nat Commun (2023)
- Release Date
- 2023-05-10
- Peptides
- Sodium-dependent lysophosphatidylcholine symporter 1-B: A
FAB light chain: B
FAB heavy chain: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.