SMTL ID : 8e40.1

Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.72, E.74, C.104, C.107 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.72, A:E.74, A:C.104, A:C.107 ZN.2: 4 residues within 4Å: Chain A: H.260, A.261, C.290, C.293 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.260, A:C.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ito, F. et al., Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase. Sci Adv (2023)

Release Date

2023-01-11

Peptides

DNA dC->dU-editing enzyme APOBEC-3G: A
Virion infectivity factor: B
Core-binding factor subunit beta: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

DNA dC->dU-editing enzyme APOBEC-3G

Virion infectivity factor

Core-binding factor subunit beta

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