SMTL ID : 8e7q.1

Crystal Structure of FosB from Bacillus cereus with Zinc and 2-Phosphonopropionic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x UXR: (2S)-2-phosphonopropanoic acid(Non-covalent)

UXR.1: 13 residues within 4Å: Chain A: Y.64, H.66, R.94, Y.105, E.115, R.124 Chain B: H.7, C.9, Y.39, W.46, A.48, N.50 Ligands: ZN.3 10 PLIP interactions: 3 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:Y.39, B:W.46 Hydrogen bonds: B:N.50, A:Y.64, A:R.94, A:R.124, A:R.124 Water bridges: A:R.96, A:S.103 Salt bridges: A:H.66 UXR.4: 13 residues within 4Å: Chain A: H.7, C.9, Y.39, W.46, A.48, N.50 Chain B: Y.64, H.66, R.94, Y.105, E.115, R.124 Ligands: ZN.5 14 PLIP interactions: 9 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:Y.64, B:R.94, B:Y.105, B:R.124, B:R.124, A:N.50 Water bridges: B:R.94, B:R.96, B:S.103, A:Y.39, A:Y.39 Salt bridges: B:H.66 Hydrophobic interactions: A:W.46, A:A.48

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 5 residues within 4Å: Chain A: V.71, E.72, D.75 Chain B: M.1, N.3 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:E.72, A:D.75, B:N.3, B:N.3

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 5 residues within 4Å: Chain A: H.66, Y.105, E.115 Chain B: H.7 Ligands: UXR.1 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:H.66, A:E.115, B:H.7 ZN.5: 5 residues within 4Å: Chain A: H.7 Chain B: H.66, Y.105, E.115 Ligands: UXR.4 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Metal complexes: B:H.66, B:E.115, A:H.7

2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.6: 2 residues within 4Å: Chain A: N.3 Chain B: E.72 No protein-ligand interaction detected (PLIP) MG.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Travis, S. et al., Identification and analysis of small molecule inhibitors of FosB from Staphylococcus aureus. Rsc Med Chem (2023)

Release Date

2023-06-14

Peptides

Metallothiol transferase FosB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Metallothiol transferase FosB

Related Entries With Identical Sequence