SMTL ID : 8ene.1

Aldehyde dehydrogenase 1 family member A1 from human liver

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: I.166, I.167, P.168, W.169, N.170, K.193, A.195, E.196, Q.197, G.226, P.227, G.230, A.231, F.244, T.245, G.246, S.247, V.250, I.254, G.271, C.303, Q.350, K.353, E.400, F.402 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:I.167, A:I.167, A:N.170, A:N.170, A:E.196, A:Q.197, A:S.247, A:Q.350, A:Q.350, A:E.400 pi-Stacking: A:F.402 NAD.2: 26 residues within 4Å: Chain B: I.166, I.167, P.168, W.169, N.170, K.193, A.195, E.196, Q.197, G.226, P.227, G.230, A.231, F.244, T.245, G.246, S.247, V.250, L.253, I.254, G.271, C.303, Q.350, K.353, E.400, F.402 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:F.402, B:F.402 Hydrogen bonds: B:I.167, B:N.170, B:N.170, B:K.193, B:E.196, B:Q.197, B:S.247, B:Q.350, B:Q.350, B:E.400 NAD.3: 26 residues within 4Å: Chain C: I.166, I.167, P.168, W.169, N.170, K.193, A.195, E.196, Q.197, G.226, P.227, G.230, A.231, F.244, T.245, G.246, S.247, V.250, L.253, I.254, G.271, C.303, Q.350, K.353, E.400, F.402 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:F.402, C:F.402 Hydrogen bonds: C:I.167, C:N.170, C:N.170, C:K.193, C:E.196, C:Q.197, C:S.247, C:Q.350, C:Q.350, C:E.400, C:E.400 NAD.4: 25 residues within 4Å: Chain D: I.166, I.167, P.168, W.169, N.170, K.193, A.195, E.196, Q.197, G.226, P.227, G.230, A.231, F.244, G.246, S.247, V.250, L.253, I.254, G.271, C.303, Q.350, K.353, E.400, F.402 13 PLIP interactions: 13 interactions with chain D Hydrophobic interactions: D:F.402, D:F.402 Hydrogen bonds: D:I.167, D:N.170, D:N.170, D:K.193, D:E.196, D:Q.197, D:G.226, D:S.247, D:Q.350, D:Q.350, D:E.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, C.C. et al., High-resolution structural-omics of human liver enzymes. Cell Rep (2023)

Release Date

2023-05-03

Peptides

Retinal dehydrogenase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Retinal dehydrogenase 1

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