- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- monomer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x XV5: (2Z)-2-[(2,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-3(2H)-one(Non-covalent)
- 1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)
BTB.3: 14 residues within 4Å:- Chain A: L.218, R.259, D.261, E.299, H.371, D.372, Q.376, N.646, F.691, D.693, N.698, Y.700, Q.744
- Ligands: CA.18
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:R.259, A:E.299, A:E.299, A:Q.376, A:N.646, A:N.698, A:Q.744
- Water bridges: A:E.299, A:Y.746
- Salt bridges: A:D.261, A:E.299, A:D.372, A:D.693
- pi-Cation interactions: A:Y.700
- 14 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 2 residues within 4Å:- Chain A: R.482, N.538
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.538
- Water bridges: A:N.538
- Salt bridges: A:R.482
SO4.5: 2 residues within 4Å:- Chain A: R.510, R.513
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.510, A:R.513
SO4.6: 2 residues within 4Å:- Chain A: K.530, A.531
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:A.531
- Water bridges: A:S.532, A:S.532
- Salt bridges: A:K.530
SO4.7: 3 residues within 4Å:- Chain A: K.653, K.654, E.655
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.654
SO4.8: 2 residues within 4Å:- Chain A: K.279, R.809
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:K.279, A:R.809
SO4.9: 7 residues within 4Å:- Chain A: Q.197, R.204, Y.205, Q.272, Y.308, D.311, D.312
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.205, A:Y.205
- Salt bridges: A:R.204
SO4.10: 3 residues within 4Å:- Chain A: N.254, K.282, H.294
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.254
- Water bridges: A:H.294
- Salt bridges: A:K.282, A:H.294
SO4.11: 3 residues within 4Å:- Chain A: K.823, K.830, Y.831
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.831
- Salt bridges: A:K.830
SO4.12: 3 residues within 4Å:- Chain A: A.414, T.415, E.416
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.415, A:T.415, A:T.415, A:E.416
SO4.13: 3 residues within 4Å:- Chain A: R.380, K.384
- Ligands: SO4.17
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.380, A:K.384
SO4.14: 4 residues within 4Å:- Chain A: T.555, D.556, N.557, G.558
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.556, A:N.557, A:N.557, A:G.558
SO4.15: 2 residues within 4Å:- Chain A: K.149, R.840
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:K.149, A:R.840
SO4.16: 2 residues within 4Å:- Chain A: R.615, V.616
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.615
SO4.17: 4 residues within 4Å:- Chain A: R.380, G.393, Y.394
- Ligands: SO4.13
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.380
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ahirwar, P. et al., Hydrogel-Encapsulated Biofilm Inhibitors Abrogate the Cariogenic Activity of Streptococcus mutans . J.Med.Chem. (2023)
- Release Date
- 2023-06-14
- Peptides
- Glucosyltransferase-I: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- monomer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x XV5: (2Z)-2-[(2,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-3(2H)-one(Non-covalent)
- 1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ahirwar, P. et al., Hydrogel-Encapsulated Biofilm Inhibitors Abrogate the Cariogenic Activity of Streptococcus mutans . J.Med.Chem. (2023)
- Release Date
- 2023-06-14
- Peptides
- Glucosyltransferase-I: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B