SMTL ID : 8fl0.1

Human nucleolar pre-60S ribosomal subunit (State H)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
22 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
2 x K: POTASSIUM ION(Non-covalent)
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Vanden Broeck, A. et al., Principles of human pre-60 S biogenesis. Science (2023)
Release Date
2023-07-12
Peptides
60S ribosomal protein L12: A
60S ribosomal protein L11: D
60S ribosomal protein L13a: E
60S ribosomal protein L14: F
60S ribosomal protein L18: G
60S ribosomal protein L18a: H
60S ribosomal protein L21: I
60S ribosomal protein L23: J
60S ribosomal protein L28: K
60S ribosomal protein L3: L
60S ribosomal protein L32: M
60S ribosomal protein L35a: N
Guanine nucleotide-binding protein-like 3: O
Nucleolar GTP-binding protein 2: P
Ribosome production factor 2 homolog: Q
Ribosome biogenesis protein NSA2 homolog: R
Notchless protein homolog 1: S
Protein LLP homolog: T
Coiled-coil domain-containing protein 86: U
60S ribosomal protein L4: V
60S ribosomal protein L5: W
60S ribosomal protein L6: X
60S ribosomal protein L7: Y
60S ribosomal protein L9: Z
Eukaryotic translation initiation factor 6: 0
mRNA turnover protein 4 homolog: 1
GTP-binding protein 4: 2
Ribosome biogenesis regulatory protein homolog: 3
Probable ribosome biogenesis protein RLP24: 4
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
BA
D
L5
E
L7
F
L8
G
LB
H
LC
I
LE
J
LG
K
LL
L
LN
M
LQ
N
LT
O
NB
P
NC
Q
ND
R
NF
S
NJ
T
NK
U
NZ
V
SA
W
SB
X
SC
Y
SD
Z
SG
0
SK
1
SQ
2
SR
3
ST
4
SV

60S ribosomal protein L12

60S ribosomal protein L11

60S ribosomal protein L13a

60S ribosomal protein L14

60S ribosomal protein L18

60S ribosomal protein L18a

60S ribosomal protein L21

60S ribosomal protein L23

60S ribosomal protein L28

60S ribosomal protein L3

60S ribosomal protein L32

60S ribosomal protein L35a

Guanine nucleotide-binding protein-like 3

Nucleolar GTP-binding protein 2

Ribosome production factor 2 homolog

Ribosome biogenesis protein NSA2 homolog

Notchless protein homolog 1

Protein LLP homolog

Coiled-coil domain-containing protein 86

60S ribosomal protein L4

60S ribosomal protein L5

60S ribosomal protein L6

60S ribosomal protein L7

60S ribosomal protein L9

Eukaryotic translation initiation factor 6

mRNA turnover protein 4 homolog

GTP-binding protein 4

Ribosome biogenesis regulatory protein homolog

Probable ribosome biogenesis protein RLP24

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3j7o.1 | 3j7q.1 | 3j92.1 | 4d5y.1 | 4d67.1 | 4v5z.20 | 4v5z.21 | 4v5z.25 | 4v5z.27 | 4v5z.41 | 4xxb.1 | 5a8l.1 | 5aj0.2 | 5aj0.3 | 5aj0.4 | 5aj0.5 | 5aj0.6 | 5aj0.8 | 5aj0.10 | 5aj0.13 | 5aj0.15 | 5aj0.17 | 5aj0.19 | 5aj0.20 | 5aj0.22 | 5aj0.31 | 5aj0.32 | 5aj0.43 | 5aj0.44 | 5lks.2  more...