SMTL ID : 8fpo.1

PCSK9 in complex with an inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MCR- ALA- 7T2- GLY- 004- 7T2- SER- 7T2- 0NC: MCR-ALA-7T2-GLY-004-7T2-SER-7T2-0NC inhibitor(Non-covalent)

MCR-ALA-7T2-GLY-004-7T2-SER-7T2-0NC.1: 21 residues within 4Å: Chain A: P.71, W.72, F.150, A.151, Q.152 Chain B: K.70, C.103, Q.104, G.105, N.165, F.166, A.186, V.194, L.196, L.199, G.200, T.201, Q.230, S.231, G.232, T.233 12 PLIP interactions: 8 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:N.165, B:F.166, B:V.194, B:L.196, B:L.199, A:W.72, A:F.150 Hydrogen bonds: B:N.165, B:S.231, B:S.231, A:Q.152 pi-Stacking: A:W.72

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain B: A.178, V.181, T.183, C.206, D.208 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grosche, P. et al., Discovery of Truncated Cyclic Peptides Targeting an Induced-Fit Pocket on PCSK9. Chemmedchem (2024)

Release Date

2024-10-16

Peptides

Proprotein convertase subtilisin/kexin type 9: A
Proprotein convertase subtilisin/kexin type 9: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proprotein convertase subtilisin/kexin type 9

Proprotein convertase subtilisin/kexin type 9

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