SMTL ID : 8fud.1 (1 other biounit)

Crystal structure of Vps29 in complex with Chaetomium thermophilum Vps5 (71 to 80)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: D.14, H.16, N.45, D.68, F.69, H.92, H.121, H.123 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.14, A:N.45, A:D.68, A:A.147 Salt bridges: A:H.16, A:R.20, A:H.92, A:H.121, A:H.123

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: K.87, Q.109, D.113, V.114, D.115, K.133 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.109, A:D.115, A:K.133 Water bridges: A:K.87, A:Q.109, A:D.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, K.E. et al., Molecular basis for the assembly of the Vps5-Vps17 SNX-BAR proteins with Retromer. Biorxiv (2024)

Release Date

2024-07-24

Peptides

Vacuolar protein sorting-associated protein 29: A
Putative vacuolar protein sorting-associated protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Vacuolar protein sorting-associated protein 29

Putative vacuolar protein sorting-associated protein

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