SMTL ID : 8fud.2 (1 other biounit)

Crystal structure of Vps29 in complex with Chaetomium thermophilum Vps5 (71 to 80)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.52, V.62, H.63, I.64, P.76, K.79 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.52, A:V.62, A:I.64, A:I.64

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: K.87, D.113, V.114, D.115, K.187 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.87 Water bridges: A:V.114 Salt bridges: A:D.113, A:D.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, K.E. et al., Molecular basis for the assembly of the Vps5-Vps17 SNX-BAR proteins with Retromer. Biorxiv (2024)

Release Date

2024-07-24

Peptides

Vacuolar protein sorting-associated protein 29: A
Putative vacuolar protein sorting-associated protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Vacuolar protein sorting-associated protein 29

Putative vacuolar protein sorting-associated protein

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