SMTL ID : 8g65.2 (1 other biounit)

Wildtype PTP1b in complex with DES4799

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x YW9: 4-(3,5-dimethyl-1H-pyrazol-1-yl)aniline(Non-covalent)

YW9.1: 10 residues within 4Å: Chain A: M.74, Q.78, R.79, S.80, L.204, S.205, P.206, H.208, G.209, P.210 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.206 Hydrogen bonds: A:G.209 Water bridges: A:S.80, A:V.211

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: R.112, V.113, H.175 Ligand excluded by PLIP

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 4 residues within 4Å: Chain A: P.38, K.39, K.41, N.42 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.41, A:N.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Greisman, J.B. et al., Discovery and Validation of the Binding Poses of Allosteric Fragment Hits to Protein Tyrosine Phosphatase 1b: From Molecular Dynamics Simulations to X-ray Crystallography. J.Chem.Inf.Model. (2023)

Release Date

2023-04-26

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein phosphatase non-receptor type 1

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