SMTL ID : 8gat.3 (2 other biounits)

Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v), based on consensus cryo-EM map with only Fab 1G01 resolved

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.197 Chain C: S.53 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.197 NAG.2: 3 residues within 4Å: Chain A: N.143, N.144, W.434 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.143, A:N.144 NAG.3: 1 residues within 4Å: Chain A: N.364 No protein-ligand interaction detected (PLIP) NAG.4: 2 residues within 4Å: Chain A: N.83, N.231 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lederhofer, J. et al., Protective human monoclonal antibodies target conserved sites of vulnerability on the underside of influenza virus neuraminidase. Immunity (2024)

Release Date

2024-02-28

Peptides

Vasodilator-stimulated phosphoprotein, Neuraminidase chimera: A
Fab 1G01, heavy chain: B
Fab 1G01, light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
M

C
N

Vasodilator-stimulated phosphoprotein, Neuraminidase chimera

Fab 1G01, heavy chain

Fab 1G01, light chain

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