SMTL ID : 8gjn.1

17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain C: F.6, G.7, F.10, N.11, V.35, L.36 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:F.10, C:L.36 Hydrogen bonds: C:N.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kwon, H.J. et al., Distinct in vitro and in vivo neutralization profiles of monoclonal antibodies elicited by the receptor binding domain of the ancestral SARS-CoV-2. J Med Virol (2023)

Release Date

2023-04-05

Peptides

Heavy chain of 17B10 Fab: A
Light chain of 17B10 Fab: B
Spike protein S2': C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Heavy chain of 17B10 Fab

Light chain of 17B10 Fab

Spike protein S2'

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