SMTL ID : 8gkq.1

Crystal Structure Analysis of Aspergillus fumigatus alkaline protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 6 residues within 4Å: Chain A: I.7, K.10, E.54 Chain B: S.105, S.107, I.108 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.10, A:E.54 Water bridges: A:S.68, B:S.107

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: N.38, R.41, A.72 No protein-ligand interaction detected (PLIP) EDO.4: 3 residues within 4Å: Chain B: L.2, T.3, T.4 No protein-ligand interaction detected (PLIP)

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain B: P.177, A.179, D.202 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:P.177, B:D.202, B:D.202, H2O.3, H2O.5

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 2 residues within 4Å: Chain B: K.270, G.271 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pattelli, O.N. et al., Targeting Aspergillus allergen oryzin with a chemical probe at atomic precision. Sci Rep (2023)

Release Date

2023-11-01

Peptides

Alkaline protease 1: A
Alkaline protease 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Alkaline protease 1

Alkaline protease 1

Related Entries With Identical Sequence