- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.28 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 38 x GOL: GLYCEROL(Non-functional Binders)
- 10 x NA: SODIUM ION(Non-functional Binders)
NA.15: 0 residues within 4Å:- (No contacts)
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.1
NA.16: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.17: 3 residues within 4Å:- Chain A: D.133, T.233
- Ligands: GOL.2
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.133
NA.39: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.63: 2 residues within 4Å:- Chain B: D.61
- Ligands: GOL.58
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.61
NA.64: 2 residues within 4Å:- Chain B: Q.17, Y.53
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.53
NA.79: 1 residues within 4Å:- Chain B: K.91
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.91
NA.87: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.88: 1 residues within 4Å:- Ligands: PG4.75
No protein-ligand interaction detected (PLIP)NA.89: 1 residues within 4Å:- Ligands: PG4.72
No protein-ligand interaction detected (PLIP)- 9 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.18: 1 residues within 4Å:- Chain A: K.59
No protein-ligand interaction detected (PLIP)PEG.19: 1 residues within 4Å:- Chain A: E.5
No protein-ligand interaction detected (PLIP)PEG.20: 7 residues within 4Å:- Chain A: V.152, S.153, G.169, D.170, N.173
- Chain B: S.7
- Ligands: PG4.71
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:D.170, A:D.170, A:Q.171, B:S.7
PEG.21: 5 residues within 4Å:- Chain A: Y.11, K.12, N.14, E.15
- Ligands: GOL.40
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.15, A:E.15
PEG.35: 4 residues within 4Å:- Chain A: N.188, P.189, L.190
- Ligands: PE8.22
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.188
PEG.41: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)PEG.42: 2 residues within 4Å:- Ligands: PG4.32, EDO.43
No protein-ligand interaction detected (PLIP)PEG.66: 2 residues within 4Å:- Chain B: E.8
- Ligands: GOL.47
No protein-ligand interaction detected (PLIP)PEG.85: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 8 x PE8: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL(Non-covalent)(Non-functional Binders)
PE8.22: 4 residues within 4Å:- Chain A: D.165, E.167
- Ligands: GOL.3, PEG.35
No protein-ligand interaction detected (PLIP)PE8.23: 2 residues within 4Å:- Chain A: K.122
- Ligands: EDO.26
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.122
PE8.24: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)PE8.51: 8 residues within 4Å:- Chain B: E.39, R.58, A.59, G.60, N.62
- Ligands: GOL.58, PG4.72, PG4.73
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.58, B:G.60, B:N.62
PE8.67: 4 residues within 4Å:- Chain B: N.62, Y.64
- Ligands: PG4.73, GOL.81
No protein-ligand interaction detected (PLIP)PE8.68: 6 residues within 4Å:- Chain B: T.13, P.14, E.15, R.58
- Ligands: GOL.52, GOL.81
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.58
PE8.69: 3 residues within 4Å:- Chain B: E.15, I.16, Q.17
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.17, B:Q.17
PE8.77: 3 residues within 4Å:- Chain B: E.33, T.34
- Ligands: GOL.84
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.34
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.25: 3 residues within 4Å:- Chain A: D.133, L.225
- Ligands: GOL.1
No protein-ligand interaction detected (PLIP)EDO.26: 3 residues within 4Å:- Chain A: G.96, K.122
- Ligands: PE8.23
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.96
EDO.27: 4 residues within 4Å:- Chain A: I.186, V.187, E.195, H.197
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.187, A:H.197
EDO.36: 2 residues within 4Å:- Chain A: H.19, E.222
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.222
EDO.43: 2 residues within 4Å:- Ligands: PEG.42, GOL.46
No protein-ligand interaction detected (PLIP)EDO.49: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)EDO.70: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 16 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.28: 4 residues within 4Å:- Chain A: T.100, D.102
- Ligands: GOL.12, PG4.30
Ligand excluded by PLIPPG4.29: 6 residues within 4Å:- Chain A: Q.1, M.2, N.3, E.5, E.6
- Ligands: PG4.37
Ligand excluded by PLIPPG4.30: 5 residues within 4Å:- Chain A: P.32, L.62, T.64, D.101
- Ligands: PG4.28
Ligand excluded by PLIPPG4.31: 5 residues within 4Å:- Chain A: E.5, E.6, I.8, K.9, N.14
Ligand excluded by PLIPPG4.32: 5 residues within 4Å:- Chain A: E.167
- Ligands: GOL.14, PEG.42, PG4.44, GOL.46
Ligand excluded by PLIPPG4.33: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPPG4.34: 1 residues within 4Å:- Chain A: E.185
Ligand excluded by PLIPPG4.37: 3 residues within 4Å:- Chain A: M.2, K.126
- Ligands: PG4.29
Ligand excluded by PLIPPG4.38: 2 residues within 4Å:- Chain A: Q.1
- Ligands: GOL.8
Ligand excluded by PLIPPG4.44: 3 residues within 4Å:- Ligands: GOL.14, PG4.32, GOL.46
Ligand excluded by PLIPPG4.50: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPPG4.71: 10 residues within 4Å:- Chain A: Q.171
- Chain B: E.8, K.10, P.11, A.12, Y.43
- Ligands: GOL.5, PEG.20, GOL.55, GOL.62
Ligand excluded by PLIPPG4.72: 5 residues within 4Å:- Chain B: E.33, T.34, Y.35
- Ligands: PE8.51, NA.89
Ligand excluded by PLIPPG4.73: 3 residues within 4Å:- Chain B: N.62
- Ligands: PE8.51, PE8.67
Ligand excluded by PLIPPG4.74: 3 residues within 4Å:- Chain B: K.24, P.25
- Ligands: GOL.82
Ligand excluded by PLIPPG4.75: 3 residues within 4Å:- Chain B: N.77
- Ligands: GOL.45, NA.88
Ligand excluded by PLIP- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chakraborty, S. et al., Structure of falcipain and human Stefin A complex. To Be Published
- Release Date
- 2023-09-13
- Peptides
- Cysteine protease falcipain-2: A
Cystatin-A: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.28 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 38 x GOL: GLYCEROL(Non-functional Binders)
- 10 x NA: SODIUM ION(Non-functional Binders)
- 9 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 8 x PE8: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL(Non-covalent)(Non-functional Binders)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 16 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chakraborty, S. et al., Structure of falcipain and human Stefin A complex. To Be Published
- Release Date
- 2023-09-13
- Peptides
- Cysteine protease falcipain-2: A
Cystatin-A: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B