SMTL ID : 8guv.1

LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.32 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: Y.36, D.100, T.104, N.107, N.108 Ligands: TCW.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Y.36, A:D.100, A:T.104 CA.3: 6 residues within 4Å: Chain B: Y.36, D.100, T.104, N.107, N.108 Ligands: TCW.4 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:Y.36, B:D.100, B:T.104 CA.6: 6 residues within 4Å: Chain C: Y.36, D.100, T.104, N.107, N.108 Ligands: TCW.7 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:Y.36, C:D.100, C:T.104 CA.8: 6 residues within 4Å: Chain D: Y.36, D.100, T.104, N.107, N.108 Ligands: TCW.9 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:Y.36, D:D.100, D:T.104

6 x TCW: Tolcapone(Non-covalent)

TCW.2: 9 residues within 4Å: Chain A: Y.36, H.50, Q.53, C.62, D.100, V.101, T.104, N.107 Ligands: CA.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.53 Hydrogen bonds: A:Y.36, A:T.104, A:N.107 TCW.4: 8 residues within 4Å: Chain B: Y.36, H.50, D.100, V.101, T.104, N.107 Ligands: CA.3, TCW.5 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.36, B:D.100, B:N.107 TCW.5: 7 residues within 4Å: Chain B: Y.36, G.37, P.38, H.50, P.51, N.107 Ligands: TCW.4 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:Y.36 TCW.7: 9 residues within 4Å: Chain C: Y.36, H.50, Q.53, C.62, D.100, V.101, T.104, N.107 Ligands: CA.6 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:Q.53 Hydrogen bonds: C:Y.36, C:N.107 TCW.9: 8 residues within 4Å: Chain D: Y.36, H.50, D.100, V.101, T.104, N.107 Ligands: CA.8, TCW.10 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Y.36, D:D.100, D:T.104, D:N.107 TCW.10: 7 residues within 4Å: Chain D: Y.36, G.37, P.38, H.50, P.51, N.107 Ligands: TCW.9 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:Y.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siebs, E. et al., LecA from Pseudomonas aeruginosa in complex with tolcapone (CAS: 134308-13-7). To Be Published

Release Date

2023-07-19

Peptides

PA-I galactophilic lectin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

PA-I galactophilic lectin

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