SMTL ID : 8hgo.1

The EGF-bound EGFR/HER2 ectodomain complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 10 residues within 4Å: Chain B: F.345, D.347, S.348, N.352, T.354, N.355, V.374, D.379, T.382, T.384 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.347

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 7 residues within 4Å: Chain A: Q.54, C.252, L.253, A.254, C.255, N.259, G.262 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.54

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain B: Q.52, N.56, N.57 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:Q.52 Hydrogen bonds: B:N.56 NAG.4: 4 residues within 4Å: Chain B: N.115, S.116, S.174, N.175 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bai, X. et al., Structure and dynamics of the EGFR/HER2 heterodimer. Cell Discov (2023)

Release Date

2023-02-08

Peptides

Receptor tyrosine-protein kinase erbB-2: A
Epidermal growth factor receptor: B
Epidermal growth factor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
C

Receptor tyrosine-protein kinase erbB-2

Epidermal growth factor receptor

Epidermal growth factor

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