SMTL ID : 8hki.1

Human TRiC open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-2-2-2-mer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)(Non-covalent)

ADP.1: 13 residues within 4Å: Chain I: L.41, G.42, P.43, D.93, G.94, T.95, T.96, S.97, V.480, G.482, I.495, E.497, K.502 10 PLIP interactions: 10 interactions with chain I Hydrogen bonds: I:G.42, I:D.93, I:G.94, I:T.95, I:T.96, I:S.97, I:S.97, I:G.482, I:E.497, I:K.502 ADP.2: 10 residues within 4Å: Chain J: G.42, D.93, G.94, T.95, T.96, G.410, G.411, G.482, I.495, E.497 8 PLIP interactions: 8 interactions with chain J Hydrogen bonds: J:D.93, J:G.94, J:T.95, J:T.96, J:G.411, J:G.482, J:E.497, J:K.502 ADP.3: 13 residues within 4Å: Chain M: Y.47, G.48, P.49, D.99, G.100, T.101, N.102, G.411, G.412, I.482, I.497, D.499, K.504 9 PLIP interactions: 9 interactions with chain M Hydrogen bonds: M:Y.47, M:D.99, M:G.100, M:T.101, M:N.102, M:N.102, M:G.412, M:D.499, M:K.504 ADP.4: 15 residues within 4Å: Chain N: Y.47, D.99, G.100, T.101, N.102, T.166, M.169, S.170, K.171, G.411, G.412, I.482, I.497, D.499, K.504 14 PLIP interactions: 14 interactions with chain N Hydrogen bonds: N:Y.47, N:Y.47, N:D.99, N:G.100, N:T.101, N:N.102, N:N.102, N:F.103, N:S.170, N:G.412, N:D.499, N:K.504 Salt bridges: N:K.171, N:K.171 ADP.5: 11 residues within 4Å: Chain O: L.38, P.40, D.90, G.91, T.92, T.93, S.94, A.411, L.481, D.496, K.501 10 PLIP interactions: 10 interactions with chain O Hydrogen bonds: O:D.90, O:G.91, O:T.93, O:T.93, O:T.93, O:T.93, O:S.94, O:A.411, O:D.496, O:K.501 ADP.6: 16 residues within 4Å: Chain P: L.38, D.90, G.91, T.92, T.93, T.154, R.157, T.158, K.159, G.410, A.411, G.412, V.479, V.494, D.496, K.501 11 PLIP interactions: 11 interactions with chain P Hydrogen bonds: P:G.91, P:T.93, P:T.93, P:R.157, P:T.158, P:T.158, P:K.159, P:A.411, P:G.412, P:D.496, P:K.501

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cong, Y. et al., Pathway and mechanism of tubulin folding mediated by TRiC/CCT conjugated with its ATPase cycle revealed by cryo-EM. To Be Published

Release Date

2023-12-13

Peptides

T-complex protein 1 subunit alpha: AB
T-complex protein 1 subunit beta: CD
T-complex protein 1 subunit delta: EF
T-complex protein 1 subunit epsilon: GH
T-complex protein 1 subunit gamma: IJ
T-complex protein 1 subunit eta: KL
T-complex protein 1 subunit theta: MN
T-complex protein 1 subunit zeta: OP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
a

B
A

C
b

D
B

E
D

F
d

G
E

H
e

I
g

J
G

K
h

L
H

M
Q

N
q

O
Z

P
z

T-complex protein 1 subunit alpha

T-complex protein 1 subunit beta

T-complex protein 1 subunit delta

T-complex protein 1 subunit epsilon

T-complex protein 1 subunit gamma

T-complex protein 1 subunit eta

T-complex protein 1 subunit theta

T-complex protein 1 subunit zeta

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