SMTL ID : 8hql.2 (5 other biounits)

Crystal structure of mouse SNX25 PX domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

6 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.1: 5 residues within 4Å: Chain A: E.39, T.40, K.41, N.42 Ligands: 1PE.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.41 Water bridges: A:N.42, A:N.42 1PE.2: 5 residues within 4Å: Chain A: R.29, N.42, W.43, T.44 Ligands: 1PE.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.44 1PE.3: 5 residues within 4Å: Chain A: S.12, A.13, H.84, G.88, R.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.13, A:H.84 1PE.4: 3 residues within 4Å: Chain A: Q.53, S.73, L.74 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.53, A:L.74 1PE.5: 3 residues within 4Å: Chain A: P.64, S.65, R.106 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.65, A:S.65, A:R.106, A:R.106 1PE.6: 4 residues within 4Å: Chain A: R.7, A.8, S.9, R.29 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.29 Water bridges: A:N.31, A:N.31

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 2 residues within 4Å: Chain A: C.25, R.48 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, Z. et al., Crystal structure of mouse SNX25 PX domain. To Be Published

Release Date

2023-12-20

Peptides

Sorting nexin-25: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Sorting nexin-25

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