SMTL ID : 8hql.4 (5 other biounits)

Crystal structure of mouse SNX25 PX domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.1: 3 residues within 4Å: Chain A: W.43, T.44 Ligands: CL.6 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.44 1PE.2: 2 residues within 4Å: Chain A: E.61, K.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.61, A:K.67 1PE.3: 2 residues within 4Å: Chain A: S.65, R.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.65, A:R.106, A:R.106 1PE.4: 4 residues within 4Å: Chain A: S.12, A.13, G.88, R.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.13, A:R.91

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: Q.53, H.56, Q.70, L.71 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.53, A:H.56, A:L.71

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 1 residues within 4Å: Ligands: 1PE.1 Ligand excluded by PLIP

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.7: 3 residues within 4Å: Chain A: Q.53, S.73, L.74 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.53, A:L.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Redox-modulated SNX25 as a novel regulator of GPCR-G protein signaling from endosomes. Redox Biol (2024)

Release Date

2023-12-20

Peptides

Sorting nexin-25: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Sorting nexin-25

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