SMTL ID : 8i7w.1

Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x OKL: 8-chloranyl-3-pentyl-7H-purine-2,6-dione(Non-covalent)

OKL.1: 14 residues within 4Å: Chain A: L.196, N.199, Y.200, W.204, M.216, L.217, L.220, R.224, C.290, S.291, S.292, F.293, L.393, Y.397 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.196, A:W.204, A:L.217 Hydrogen bonds: A:R.224, A:R.224, A:S.292, A:S.292, A:F.293, A:Y.397, A:Y.397

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J.H. et al., Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun (2023)

Release Date

2024-02-07

Peptides

Human hydroxycarboxylic acid receptor 2,Hydroxycarboxylic acid receptor 2: A
Guanine nucleotide-binding protein G(i) subunit alpha-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
scFv16: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
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Human hydroxycarboxylic acid receptor 2,Hydroxycarboxylic acid receptor 2

Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

scFv16

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