SMTL ID : 8idx.1 (1 other biounit)

Structure of p205 HIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: Q.54, F.56, K.84, G.85 Ligands: EDO.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.54 PEG.2: 8 residues within 4Å: Chain A: T.27, T.48, H.57, H.179, F.181, K.203 Ligands: EDO.10, EDO.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.203 Water bridges: A:H.57 PEG.3: 7 residues within 4Å: Chain A: C.182, H.184, G.197, D.198, H.199, S.200 Ligands: EDO.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.198, A:H.199, A:S.200 Water bridges: A:K.59

15 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: Q.54, Y.55, F.56, H.57 Ligands: PEG.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.54 Water bridges: A:H.57, A:H.57 EDO.5: 2 residues within 4Å: Chain A: T.205, K.206 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.206 EDO.6: 4 residues within 4Å: Chain A: K.186, V.195, C.196 Ligands: PEG.3 No protein-ligand interaction detected (PLIP) EDO.7: 3 residues within 4Å: Chain A: S.53, C.109, I.110 No protein-ligand interaction detected (PLIP) EDO.8: 5 residues within 4Å: Chain A: K.140, K.141, K.142, S.149, E.151 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.142, A:S.149, A:E.151 EDO.9: 3 residues within 4Å: Chain A: V.162, K.193, V.195 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.193 EDO.10: 10 residues within 4Å: Chain A: Y.55, H.57, A.114, N.115, A.116, S.117, Y.133, G.134 Ligands: PEG.2, EDO.12 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.55, A:Y.55 Water bridges: A:S.117 EDO.11: 5 residues within 4Å: Chain A: K.42, N.43, F.61, N.62, I.63 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.43, A:N.43, A:I.63, A:E.91 EDO.12: 8 residues within 4Å: Chain A: Y.133, G.134, V.135, H.179, L.180, F.181 Ligands: PEG.2, EDO.10 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.134, A:L.180 EDO.13: 4 residues within 4Å: Chain A: P.20, L.21, T.22, Q.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.22, A:T.22 Water bridges: A:T.22 EDO.14: 4 residues within 4Å: Chain A: V.106, P.107, N.108, T.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.106, A:N.108 EDO.15: 11 residues within 4Å: Chain A: T.22, V.23, M.24, A.50, T.51, V.52, F.74, Q.102, M.103, I.104, V.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.102, A:I.104 Water bridges: A:V.52 EDO.16: 6 residues within 4Å: Chain A: T.76, L.96, E.97, A.98, A.99, Q.102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.76, A:A.99 EDO.17: 2 residues within 4Å: Chain A: F.56, Y.80 No protein-ligand interaction detected (PLIP) EDO.18: 4 residues within 4Å: Chain A: K.140, K.141, K.173, E.174 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.141, A:E.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y.L. et al., Structure of p205 HIN. to Be published

Release Date

2024-02-14

Peptides

Interferon-activable protein 205-B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interferon-activable protein 205-B

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