SMTL ID : 8idx.2 (1 other biounit)

Structure of p205 HIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 4 residues within 4Å: Chain A: K.119, C.121, D.122, K.125 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.119, A:D.122, A:K.125 PGE.4: 8 residues within 4Å: Chain A: H.57, K.84, I.86, P.118, V.131, F.132, Y.133 Ligands: EDO.6 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.55, A:Y.55, A:Y.133 Water bridges: A:K.84, A:V.131

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 11 residues within 4Å: Chain A: T.22, V.23, M.24, A.50, T.51, V.52, F.74, Q.102, M.103, I.104, V.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.52, A:Q.102, A:I.104 PEG.3: 8 residues within 4Å: Chain A: T.48, H.57, Y.133, G.134, V.135, H.179, L.180, F.181 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.57, A:G.134, A:H.179 Water bridges: A:H.57

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 2 residues within 4Å: Chain A: F.61, E.88 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.91 Water bridges: A:E.88, A:H.199 EDO.6: 4 residues within 4Å: Chain A: Y.55, H.57 Ligands: PGE.4, EDO.13 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.55 EDO.7: 4 residues within 4Å: Chain A: H.184, K.186, V.195, C.196 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.184 EDO.8: 2 residues within 4Å: Chain A: E.33, Q.166 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.33 Water bridges: A:E.33 EDO.9: 5 residues within 4Å: Chain A: H.17, E.19, P.20, L.21, Y.80 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.17, A:E.19 EDO.10: 3 residues within 4Å: Chain A: Q.166, W.167 Ligands: EDO.12 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.166, A:Q.166 EDO.11: 4 residues within 4Å: Chain A: H.17, L.21, Y.80, E.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.80 Water bridges: A:E.82 EDO.12: 4 residues within 4Å: Chain A: F.201, V.202, K.203 Ligands: EDO.10 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.202 EDO.13: 4 residues within 4Å: Chain A: Q.54, Y.55, F.56 Ligands: EDO.6 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.55 EDO.14: 3 residues within 4Å: Chain A: P.20, T.22, Q.102 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.22, A:T.22 Water bridges: A:T.22, A:T.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y.L. et al., Structure of p205 HIN. to Be published

Release Date

2024-02-14

Peptides

Interferon-activable protein 205-B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Interferon-activable protein 205-B

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