SMTL ID : 8ieb.1

Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x 01: [(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate(Non-covalent)

01.1: 23 residues within 4Å: Chain A: L.124, L.127, C.128, T.131, W.183, F.215, C.216, A.217, S.218, S.221, W.224, I.225, W.229, K.232, L.236, L.267, V.268, L.274, F.275, T.278, R.279, C.299, T.300 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.124, A:L.124, A:L.127, A:L.127, A:T.131, A:W.183, A:W.224, A:W.229, A:K.232, A:K.232, A:L.236, A:L.267, A:V.268, A:F.275, A:T.278 Hydrogen bonds: A:S.218 Salt bridges: A:R.279 pi-Cation interactions: A:F.215 01.2: 21 residues within 4Å: Chain B: L.124, C.128, T.131, W.183, F.215, C.216, A.217, S.218, S.221, W.224, I.228, W.229, K.232, L.236, L.267, V.268, L.274, T.278, R.279, H.282, C.299 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:L.124, B:L.124, B:T.131, B:W.183, B:W.224, B:I.228, B:W.229, B:K.232, B:L.236, B:L.267, B:L.267, B:V.268, B:L.274, B:T.278 Salt bridges: B:R.279 pi-Cation interactions: B:F.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, J. et al., Constitutive activation mechanism of a class C GPCR. Nat.Struct.Mol.Biol. (2024)

Release Date

2024-02-14

Peptides

Probable G-protein coupled receptor 156: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Probable G-protein coupled receptor 156

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