SMTL ID : 8j0n.1

cryo-EM structure of human EMC

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-mer

Ligands

3 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 2 residues within 4Å: Chain A: N.818, A.821 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.2: 2 residues within 4Å: Chain A: N.913 Chain G: F.149 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.3: 2 residues within 4Å: Chain I: H.141, N.182 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, M. et al., Structural insights into human EMC and its interaction with VDAC. Aging (Albany NY) (2024)

Release Date

2024-04-03

Peptides

ER membrane protein complex subunit 1: A
ER membrane protein complex subunit 2: B
ER membrane protein complex subunit 3: C
ER membrane protein complex subunit 4: D
ER membrane protein complex subunit 5: E
ER membrane protein complex subunit 6: F
ER membrane protein complex subunit 7: G
ER membrane protein complex subunit 8: H
ER membrane protein complex subunit 10: I

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
J

Membrane

We predict this structure to be a membrane protein.
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ER membrane protein complex subunit 1

ER membrane protein complex subunit 2

ER membrane protein complex subunit 3

ER membrane protein complex subunit 4

ER membrane protein complex subunit 5

ER membrane protein complex subunit 6

ER membrane protein complex subunit 7

ER membrane protein complex subunit 8

ER membrane protein complex subunit 10

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