SMTL ID : 8j0v.1

Crystal structure of horse spleen L-ferritin at -100deg Celsius.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-24-mer

Ligands

96 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: Y.36, V.42, G.90, T.91, E.163 Chain G: R.153 Ligand excluded by PLIP EDO.2: 4 residues within 4Å: Chain A: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.3: 6 residues within 4Å: Chain A: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.4: 5 residues within 4Å: Chain A: K.67 Chain X: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain B: Y.36, V.42, G.90, T.91, E.163 Chain H: R.153 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain B: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.15: 6 residues within 4Å: Chain B: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.16: 5 residues within 4Å: Chain B: K.67 Chain U: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.25: 6 residues within 4Å: Chain C: Y.36, V.42, G.90, T.91, E.163 Chain F: R.153 Ligand excluded by PLIP EDO.26: 4 residues within 4Å: Chain C: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.27: 6 residues within 4Å: Chain C: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.28: 5 residues within 4Å: Chain C: K.67 Chain V: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.37: 6 residues within 4Å: Chain D: Y.36, V.42, G.90, T.91, E.163 Chain E: R.153 Ligand excluded by PLIP EDO.38: 4 residues within 4Å: Chain D: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.39: 6 residues within 4Å: Chain D: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.40: 5 residues within 4Å: Chain D: K.67 Chain W: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.49: 6 residues within 4Å: Chain C: R.153 Chain E: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.50: 4 residues within 4Å: Chain E: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.51: 6 residues within 4Å: Chain E: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.52: 5 residues within 4Å: Chain E: K.67 Chain L: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.61: 6 residues within 4Å: Chain D: R.153 Chain F: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.62: 4 residues within 4Å: Chain F: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.63: 6 residues within 4Å: Chain F: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.64: 5 residues within 4Å: Chain F: K.67 Chain I: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.73: 6 residues within 4Å: Chain B: R.153 Chain G: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.74: 4 residues within 4Å: Chain G: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.75: 6 residues within 4Å: Chain G: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.76: 5 residues within 4Å: Chain G: K.67 Chain J: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.85: 6 residues within 4Å: Chain A: R.153 Chain H: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.86: 4 residues within 4Å: Chain H: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.87: 6 residues within 4Å: Chain H: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.88: 5 residues within 4Å: Chain H: K.67 Chain K: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.97: 6 residues within 4Å: Chain I: Y.36, V.42, G.90, T.91, E.163 Chain N: R.153 Ligand excluded by PLIP EDO.98: 4 residues within 4Å: Chain I: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.99: 6 residues within 4Å: Chain I: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.100: 5 residues within 4Å: Chain F: F.35, D.38, C.48, R.52 Chain I: K.67 Ligand excluded by PLIP EDO.109: 6 residues within 4Å: Chain J: Y.36, V.42, G.90, T.91, E.163 Chain M: R.153 Ligand excluded by PLIP EDO.110: 4 residues within 4Å: Chain J: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.111: 6 residues within 4Å: Chain J: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.112: 5 residues within 4Å: Chain G: F.35, D.38, C.48, R.52 Chain J: K.67 Ligand excluded by PLIP EDO.121: 6 residues within 4Å: Chain K: Y.36, V.42, G.90, T.91, E.163 Chain O: R.153 Ligand excluded by PLIP EDO.122: 4 residues within 4Å: Chain K: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.123: 6 residues within 4Å: Chain K: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.124: 5 residues within 4Å: Chain H: F.35, D.38, C.48, R.52 Chain K: K.67 Ligand excluded by PLIP EDO.133: 6 residues within 4Å: Chain L: Y.36, V.42, G.90, T.91, E.163 Chain P: R.153 Ligand excluded by PLIP EDO.134: 4 residues within 4Å: Chain L: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.135: 6 residues within 4Å: Chain L: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.136: 5 residues within 4Å: Chain E: F.35, D.38, C.48, R.52 Chain L: K.67 Ligand excluded by PLIP EDO.145: 6 residues within 4Å: Chain I: R.153 Chain M: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.146: 4 residues within 4Å: Chain M: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.147: 6 residues within 4Å: Chain M: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.148: 5 residues within 4Å: Chain M: K.67 Chain S: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.157: 6 residues within 4Å: Chain J: R.153 Chain N: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.158: 4 residues within 4Å: Chain N: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.159: 6 residues within 4Å: Chain N: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.160: 5 residues within 4Å: Chain N: K.67 Chain R: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.169: 6 residues within 4Å: Chain L: R.153 Chain O: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.170: 4 residues within 4Å: Chain O: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.171: 6 residues within 4Å: Chain O: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.172: 5 residues within 4Å: Chain O: K.67 Chain Q: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.181: 6 residues within 4Å: Chain K: R.153 Chain P: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.182: 4 residues within 4Å: Chain P: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.183: 6 residues within 4Å: Chain P: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.184: 5 residues within 4Å: Chain P: K.67 Chain T: F.35, D.38, C.48, R.52 Ligand excluded by PLIP EDO.193: 6 residues within 4Å: Chain Q: Y.36, V.42, G.90, T.91, E.163 Chain U: R.153 Ligand excluded by PLIP EDO.194: 4 residues within 4Å: Chain Q: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.195: 6 residues within 4Å: Chain Q: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.196: 5 residues within 4Å: Chain O: F.35, D.38, C.48, R.52 Chain Q: K.67 Ligand excluded by PLIP EDO.205: 6 residues within 4Å: Chain R: Y.36, V.42, G.90, T.91, E.163 Chain V: R.153 Ligand excluded by PLIP EDO.206: 4 residues within 4Å: Chain R: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.207: 6 residues within 4Å: Chain R: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.208: 5 residues within 4Å: Chain N: F.35, D.38, C.48, R.52 Chain R: K.67 Ligand excluded by PLIP EDO.217: 6 residues within 4Å: Chain S: Y.36, V.42, G.90, T.91, E.163 Chain X: R.153 Ligand excluded by PLIP EDO.218: 4 residues within 4Å: Chain S: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.219: 6 residues within 4Å: Chain S: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.220: 5 residues within 4Å: Chain M: F.35, D.38, C.48, R.52 Chain S: K.67 Ligand excluded by PLIP EDO.229: 6 residues within 4Å: Chain T: Y.36, V.42, G.90, T.91, E.163 Chain W: R.153 Ligand excluded by PLIP EDO.230: 4 residues within 4Å: Chain T: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.231: 6 residues within 4Å: Chain T: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.232: 5 residues within 4Å: Chain P: F.35, D.38, C.48, R.52 Chain T: K.67 Ligand excluded by PLIP EDO.241: 6 residues within 4Å: Chain R: R.153 Chain U: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.242: 4 residues within 4Å: Chain U: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.243: 6 residues within 4Å: Chain U: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.244: 5 residues within 4Å: Chain B: F.35, D.38, C.48, R.52 Chain U: K.67 Ligand excluded by PLIP EDO.253: 6 residues within 4Å: Chain Q: R.153 Chain V: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.254: 4 residues within 4Å: Chain V: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.255: 6 residues within 4Å: Chain V: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.256: 5 residues within 4Å: Chain C: F.35, D.38, C.48, R.52 Chain V: K.67 Ligand excluded by PLIP EDO.265: 6 residues within 4Å: Chain S: R.153 Chain W: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.266: 4 residues within 4Å: Chain W: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.267: 6 residues within 4Å: Chain W: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.268: 5 residues within 4Å: Chain D: F.35, D.38, C.48, R.52 Chain W: K.67 Ligand excluded by PLIP EDO.277: 6 residues within 4Å: Chain T: R.153 Chain X: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.278: 4 residues within 4Å: Chain X: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.279: 6 residues within 4Å: Chain X: Y.23, K.58, H.132, F.133, E.136, E.137 Ligand excluded by PLIP EDO.280: 5 residues within 4Å: Chain A: F.35, D.38, C.48, R.52 Chain X: K.67 Ligand excluded by PLIP

72 x CD: CADMIUM ION(Non-covalent)

CD.5: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.7, CD.125, CD.127, CD.233, CD.235 Ligand excluded by PLIP CD.6: 2 residues within 4Å: Chain A: D.80 Ligands: CL.12 Ligand excluded by PLIP CD.7: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.5, CD.125, CD.127, CD.233, CD.235 Ligand excluded by PLIP CD.17: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.19, CD.113, CD.115, CD.209, CD.211 Ligand excluded by PLIP CD.18: 2 residues within 4Å: Chain B: D.80 Ligands: CL.24 Ligand excluded by PLIP CD.19: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.17, CD.113, CD.115, CD.209, CD.211 Ligand excluded by PLIP CD.29: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.31, CD.137, CD.139, CD.197, CD.199 Ligand excluded by PLIP CD.30: 2 residues within 4Å: Chain C: D.80 Ligands: CL.36 Ligand excluded by PLIP CD.31: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.29, CD.137, CD.139, CD.197, CD.199 Ligand excluded by PLIP CD.41: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.43, CD.101, CD.103, CD.221, CD.223 Ligand excluded by PLIP CD.42: 2 residues within 4Å: Chain D: D.80 Ligands: CL.48 Ligand excluded by PLIP CD.43: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.41, CD.101, CD.103, CD.221, CD.223 Ligand excluded by PLIP CD.53: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.55, CD.185, CD.187, CD.269, CD.271 Ligand excluded by PLIP CD.54: 2 residues within 4Å: Chain E: D.80 Ligands: CL.60 Ligand excluded by PLIP CD.55: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.53, CD.185, CD.187, CD.269, CD.271 Ligand excluded by PLIP CD.65: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.67, CD.161, CD.163, CD.257, CD.259 Ligand excluded by PLIP CD.66: 2 residues within 4Å: Chain F: D.80 Ligands: CL.72 Ligand excluded by PLIP CD.67: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.65, CD.161, CD.163, CD.257, CD.259 Ligand excluded by PLIP CD.77: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.79, CD.149, CD.151, CD.281, CD.283 Ligand excluded by PLIP CD.78: 2 residues within 4Å: Chain G: D.80 Ligands: CL.84 Ligand excluded by PLIP CD.79: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.77, CD.149, CD.151, CD.281, CD.283 Ligand excluded by PLIP CD.89: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.91, CD.173, CD.175, CD.245, CD.247 Ligand excluded by PLIP CD.90: 2 residues within 4Å: Chain H: D.80 Ligands: CL.96 Ligand excluded by PLIP CD.91: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.89, CD.173, CD.175, CD.245, CD.247 Ligand excluded by PLIP CD.101: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.41, CD.43, CD.103, CD.221, CD.223 Ligand excluded by PLIP CD.102: 2 residues within 4Å: Chain I: D.80 Ligands: CL.108 Ligand excluded by PLIP CD.103: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.41, CD.43, CD.101, CD.221, CD.223 Ligand excluded by PLIP CD.113: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.17, CD.19, CD.115, CD.209, CD.211 Ligand excluded by PLIP CD.114: 2 residues within 4Å: Chain J: D.80 Ligands: CL.120 Ligand excluded by PLIP CD.115: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.17, CD.19, CD.113, CD.209, CD.211 Ligand excluded by PLIP CD.125: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.5, CD.7, CD.127, CD.233, CD.235 Ligand excluded by PLIP CD.126: 2 residues within 4Å: Chain K: D.80 Ligands: CL.132 Ligand excluded by PLIP CD.127: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.5, CD.7, CD.125, CD.233, CD.235 Ligand excluded by PLIP CD.137: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.29, CD.31, CD.139, CD.197, CD.199 Ligand excluded by PLIP CD.138: 2 residues within 4Å: Chain L: D.80 Ligands: CL.144 Ligand excluded by PLIP CD.139: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.29, CD.31, CD.137, CD.197, CD.199 Ligand excluded by PLIP CD.149: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.77, CD.79, CD.151, CD.281, CD.283 Ligand excluded by PLIP CD.150: 2 residues within 4Å: Chain M: D.80 Ligands: CL.156 Ligand excluded by PLIP CD.151: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.77, CD.79, CD.149, CD.281, CD.283 Ligand excluded by PLIP CD.161: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.65, CD.67, CD.163, CD.257, CD.259 Ligand excluded by PLIP CD.162: 2 residues within 4Å: Chain N: D.80 Ligands: CL.168 Ligand excluded by PLIP CD.163: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.65, CD.67, CD.161, CD.257, CD.259 Ligand excluded by PLIP CD.173: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.89, CD.91, CD.175, CD.245, CD.247 Ligand excluded by PLIP CD.174: 2 residues within 4Å: Chain O: D.80 Ligands: CL.180 Ligand excluded by PLIP CD.175: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.89, CD.91, CD.173, CD.245, CD.247 Ligand excluded by PLIP CD.185: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.53, CD.55, CD.187, CD.269, CD.271 Ligand excluded by PLIP CD.186: 2 residues within 4Å: Chain P: D.80 Ligands: CL.192 Ligand excluded by PLIP CD.187: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.53, CD.55, CD.185, CD.269, CD.271 Ligand excluded by PLIP CD.197: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.29, CD.31, CD.137, CD.139, CD.199 Ligand excluded by PLIP CD.198: 2 residues within 4Å: Chain Q: D.80 Ligands: CL.204 Ligand excluded by PLIP CD.199: 8 residues within 4Å: Chain C: E.130 Chain L: E.130 Chain Q: E.130 Ligands: CD.29, CD.31, CD.137, CD.139, CD.197 Ligand excluded by PLIP CD.209: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.17, CD.19, CD.113, CD.115, CD.211 Ligand excluded by PLIP CD.210: 2 residues within 4Å: Chain R: D.80 Ligands: CL.216 Ligand excluded by PLIP CD.211: 8 residues within 4Å: Chain B: E.130 Chain J: E.130 Chain R: E.130 Ligands: CD.17, CD.19, CD.113, CD.115, CD.209 Ligand excluded by PLIP CD.221: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.41, CD.43, CD.101, CD.103, CD.223 Ligand excluded by PLIP CD.222: 2 residues within 4Å: Chain S: D.80 Ligands: CL.228 Ligand excluded by PLIP CD.223: 8 residues within 4Å: Chain D: E.130 Chain I: E.130 Chain S: E.130 Ligands: CD.41, CD.43, CD.101, CD.103, CD.221 Ligand excluded by PLIP CD.233: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.5, CD.7, CD.125, CD.127, CD.235 Ligand excluded by PLIP CD.234: 2 residues within 4Å: Chain T: D.80 Ligands: CL.240 Ligand excluded by PLIP CD.235: 8 residues within 4Å: Chain A: E.130 Chain K: E.130 Chain T: E.130 Ligands: CD.5, CD.7, CD.125, CD.127, CD.233 Ligand excluded by PLIP CD.245: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.89, CD.91, CD.173, CD.175, CD.247 Ligand excluded by PLIP CD.246: 2 residues within 4Å: Chain U: D.80 Ligands: CL.252 Ligand excluded by PLIP CD.247: 8 residues within 4Å: Chain H: E.130 Chain O: E.130 Chain U: E.130 Ligands: CD.89, CD.91, CD.173, CD.175, CD.245 Ligand excluded by PLIP CD.257: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.65, CD.67, CD.161, CD.163, CD.259 Ligand excluded by PLIP CD.258: 2 residues within 4Å: Chain V: D.80 Ligands: CL.264 Ligand excluded by PLIP CD.259: 8 residues within 4Å: Chain F: E.130 Chain N: E.130 Chain V: E.130 Ligands: CD.65, CD.67, CD.161, CD.163, CD.257 Ligand excluded by PLIP CD.269: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.53, CD.55, CD.185, CD.187, CD.271 Ligand excluded by PLIP CD.270: 2 residues within 4Å: Chain W: D.80 Ligands: CL.276 Ligand excluded by PLIP CD.271: 8 residues within 4Å: Chain E: E.130 Chain P: E.130 Chain W: E.130 Ligands: CD.53, CD.55, CD.185, CD.187, CD.269 Ligand excluded by PLIP CD.281: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.77, CD.79, CD.149, CD.151, CD.283 Ligand excluded by PLIP CD.282: 2 residues within 4Å: Chain X: D.80 Ligands: CL.288 Ligand excluded by PLIP CD.283: 8 residues within 4Å: Chain G: E.130 Chain M: E.130 Chain X: E.130 Ligands: CD.77, CD.79, CD.149, CD.151, CD.281 Ligand excluded by PLIP

96 x SO4: SULFATE ION(Non-functional Binders)

SO4.8: 2 residues within 4Å: Chain A: Q.6, N.7 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain A: L.24, S.27, Y.28, R.59 Ligands: SO4.285 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain A: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain A: K.143, D.146, H.147 Ligand excluded by PLIP SO4.20: 2 residues within 4Å: Chain B: Q.6, N.7 Ligand excluded by PLIP SO4.21: 5 residues within 4Å: Chain B: L.24, S.27, Y.28, R.59 Ligands: SO4.249 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain B: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain B: K.143, D.146, H.147 Ligand excluded by PLIP SO4.32: 2 residues within 4Å: Chain C: Q.6, N.7 Ligand excluded by PLIP SO4.33: 5 residues within 4Å: Chain C: L.24, S.27, Y.28, R.59 Ligands: SO4.261 Ligand excluded by PLIP SO4.34: 3 residues within 4Å: Chain C: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.35: 3 residues within 4Å: Chain C: K.143, D.146, H.147 Ligand excluded by PLIP SO4.44: 2 residues within 4Å: Chain D: Q.6, N.7 Ligand excluded by PLIP SO4.45: 5 residues within 4Å: Chain D: L.24, S.27, Y.28, R.59 Ligands: SO4.273 Ligand excluded by PLIP SO4.46: 3 residues within 4Å: Chain D: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain D: K.143, D.146, H.147 Ligand excluded by PLIP SO4.56: 2 residues within 4Å: Chain E: Q.6, N.7 Ligand excluded by PLIP SO4.57: 5 residues within 4Å: Chain E: L.24, S.27, Y.28, R.59 Ligands: SO4.141 Ligand excluded by PLIP SO4.58: 3 residues within 4Å: Chain E: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.59: 3 residues within 4Å: Chain E: K.143, D.146, H.147 Ligand excluded by PLIP SO4.68: 2 residues within 4Å: Chain F: Q.6, N.7 Ligand excluded by PLIP SO4.69: 5 residues within 4Å: Chain F: L.24, S.27, Y.28, R.59 Ligands: SO4.105 Ligand excluded by PLIP SO4.70: 3 residues within 4Å: Chain F: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.71: 3 residues within 4Å: Chain F: K.143, D.146, H.147 Ligand excluded by PLIP SO4.80: 2 residues within 4Å: Chain G: Q.6, N.7 Ligand excluded by PLIP SO4.81: 5 residues within 4Å: Chain G: L.24, S.27, Y.28, R.59 Ligands: SO4.117 Ligand excluded by PLIP SO4.82: 3 residues within 4Å: Chain G: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.83: 3 residues within 4Å: Chain G: K.143, D.146, H.147 Ligand excluded by PLIP SO4.92: 2 residues within 4Å: Chain H: Q.6, N.7 Ligand excluded by PLIP SO4.93: 5 residues within 4Å: Chain H: L.24, S.27, Y.28, R.59 Ligands: SO4.129 Ligand excluded by PLIP SO4.94: 3 residues within 4Å: Chain H: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.95: 3 residues within 4Å: Chain H: K.143, D.146, H.147 Ligand excluded by PLIP SO4.104: 2 residues within 4Å: Chain I: Q.6, N.7 Ligand excluded by PLIP SO4.105: 5 residues within 4Å: Chain I: L.24, S.27, Y.28, R.59 Ligands: SO4.69 Ligand excluded by PLIP SO4.106: 3 residues within 4Å: Chain I: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.107: 3 residues within 4Å: Chain I: K.143, D.146, H.147 Ligand excluded by PLIP SO4.116: 2 residues within 4Å: Chain J: Q.6, N.7 Ligand excluded by PLIP SO4.117: 5 residues within 4Å: Chain J: L.24, S.27, Y.28, R.59 Ligands: SO4.81 Ligand excluded by PLIP SO4.118: 3 residues within 4Å: Chain J: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.119: 3 residues within 4Å: Chain J: K.143, D.146, H.147 Ligand excluded by PLIP SO4.128: 2 residues within 4Å: Chain K: Q.6, N.7 Ligand excluded by PLIP SO4.129: 5 residues within 4Å: Chain K: L.24, S.27, Y.28, R.59 Ligands: SO4.93 Ligand excluded by PLIP SO4.130: 3 residues within 4Å: Chain K: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.131: 3 residues within 4Å: Chain K: K.143, D.146, H.147 Ligand excluded by PLIP SO4.140: 2 residues within 4Å: Chain L: Q.6, N.7 Ligand excluded by PLIP SO4.141: 5 residues within 4Å: Chain L: L.24, S.27, Y.28, R.59 Ligands: SO4.57 Ligand excluded by PLIP SO4.142: 3 residues within 4Å: Chain L: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.143: 3 residues within 4Å: Chain L: K.143, D.146, H.147 Ligand excluded by PLIP SO4.152: 2 residues within 4Å: Chain M: Q.6, N.7 Ligand excluded by PLIP SO4.153: 5 residues within 4Å: Chain M: L.24, S.27, Y.28, R.59 Ligands: SO4.225 Ligand excluded by PLIP SO4.154: 3 residues within 4Å: Chain M: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.155: 3 residues within 4Å: Chain M: K.143, D.146, H.147 Ligand excluded by PLIP SO4.164: 2 residues within 4Å: Chain N: Q.6, N.7 Ligand excluded by PLIP SO4.165: 5 residues within 4Å: Chain N: L.24, S.27, Y.28, R.59 Ligands: SO4.213 Ligand excluded by PLIP SO4.166: 3 residues within 4Å: Chain N: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.167: 3 residues within 4Å: Chain N: K.143, D.146, H.147 Ligand excluded by PLIP SO4.176: 2 residues within 4Å: Chain O: Q.6, N.7 Ligand excluded by PLIP SO4.177: 5 residues within 4Å: Chain O: L.24, S.27, Y.28, R.59 Ligands: SO4.201 Ligand excluded by PLIP SO4.178: 3 residues within 4Å: Chain O: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.179: 3 residues within 4Å: Chain O: K.143, D.146, H.147 Ligand excluded by PLIP SO4.188: 2 residues within 4Å: Chain P: Q.6, N.7 Ligand excluded by PLIP SO4.189: 5 residues within 4Å: Chain P: L.24, S.27, Y.28, R.59 Ligands: SO4.237 Ligand excluded by PLIP SO4.190: 3 residues within 4Å: Chain P: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.191: 3 residues within 4Å: Chain P: K.143, D.146, H.147 Ligand excluded by PLIP SO4.200: 2 residues within 4Å: Chain Q: Q.6, N.7 Ligand excluded by PLIP SO4.201: 5 residues within 4Å: Chain Q: L.24, S.27, Y.28, R.59 Ligands: SO4.177 Ligand excluded by PLIP SO4.202: 3 residues within 4Å: Chain Q: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.203: 3 residues within 4Å: Chain Q: K.143, D.146, H.147 Ligand excluded by PLIP SO4.212: 2 residues within 4Å: Chain R: Q.6, N.7 Ligand excluded by PLIP SO4.213: 5 residues within 4Å: Chain R: L.24, S.27, Y.28, R.59 Ligands: SO4.165 Ligand excluded by PLIP SO4.214: 3 residues within 4Å: Chain R: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.215: 3 residues within 4Å: Chain R: K.143, D.146, H.147 Ligand excluded by PLIP SO4.224: 2 residues within 4Å: Chain S: Q.6, N.7 Ligand excluded by PLIP SO4.225: 5 residues within 4Å: Chain S: L.24, S.27, Y.28, R.59 Ligands: SO4.153 Ligand excluded by PLIP SO4.226: 3 residues within 4Å: Chain S: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.227: 3 residues within 4Å: Chain S: K.143, D.146, H.147 Ligand excluded by PLIP SO4.236: 2 residues within 4Å: Chain T: Q.6, N.7 Ligand excluded by PLIP SO4.237: 5 residues within 4Å: Chain T: L.24, S.27, Y.28, R.59 Ligands: SO4.189 Ligand excluded by PLIP SO4.238: 3 residues within 4Å: Chain T: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.239: 3 residues within 4Å: Chain T: K.143, D.146, H.147 Ligand excluded by PLIP SO4.248: 2 residues within 4Å: Chain U: Q.6, N.7 Ligand excluded by PLIP SO4.249: 5 residues within 4Å: Chain U: L.24, S.27, Y.28, R.59 Ligands: SO4.21 Ligand excluded by PLIP SO4.250: 3 residues within 4Å: Chain U: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.251: 3 residues within 4Å: Chain U: K.143, D.146, H.147 Ligand excluded by PLIP SO4.260: 2 residues within 4Å: Chain V: Q.6, N.7 Ligand excluded by PLIP SO4.261: 5 residues within 4Å: Chain V: L.24, S.27, Y.28, R.59 Ligands: SO4.33 Ligand excluded by PLIP SO4.262: 3 residues within 4Å: Chain V: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.263: 3 residues within 4Å: Chain V: K.143, D.146, H.147 Ligand excluded by PLIP SO4.272: 2 residues within 4Å: Chain W: Q.6, N.7 Ligand excluded by PLIP SO4.273: 5 residues within 4Å: Chain W: L.24, S.27, Y.28, R.59 Ligands: SO4.45 Ligand excluded by PLIP SO4.274: 3 residues within 4Å: Chain W: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.275: 3 residues within 4Å: Chain W: K.143, D.146, H.147 Ligand excluded by PLIP SO4.284: 2 residues within 4Å: Chain X: Q.6, N.7 Ligand excluded by PLIP SO4.285: 5 residues within 4Å: Chain X: L.24, S.27, Y.28, R.59 Ligands: SO4.9 Ligand excluded by PLIP SO4.286: 3 residues within 4Å: Chain X: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.287: 3 residues within 4Å: Chain X: K.143, D.146, H.147 Ligand excluded by PLIP

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.12: 3 residues within 4Å: Chain A: D.80 Chain X: K.83 Ligands: CD.6 Ligand excluded by PLIP CL.24: 3 residues within 4Å: Chain B: D.80 Chain U: K.83 Ligands: CD.18 Ligand excluded by PLIP CL.36: 3 residues within 4Å: Chain C: D.80 Chain V: K.83 Ligands: CD.30 Ligand excluded by PLIP CL.48: 3 residues within 4Å: Chain D: D.80 Chain W: K.83 Ligands: CD.42 Ligand excluded by PLIP CL.60: 3 residues within 4Å: Chain E: D.80 Chain L: K.83 Ligands: CD.54 Ligand excluded by PLIP CL.72: 3 residues within 4Å: Chain F: D.80 Chain I: K.83 Ligands: CD.66 Ligand excluded by PLIP CL.84: 3 residues within 4Å: Chain G: D.80 Chain J: K.83 Ligands: CD.78 Ligand excluded by PLIP CL.96: 3 residues within 4Å: Chain H: D.80 Chain K: K.83 Ligands: CD.90 Ligand excluded by PLIP CL.108: 3 residues within 4Å: Chain F: K.83 Chain I: D.80 Ligands: CD.102 Ligand excluded by PLIP CL.120: 3 residues within 4Å: Chain G: K.83 Chain J: D.80 Ligands: CD.114 Ligand excluded by PLIP CL.132: 3 residues within 4Å: Chain H: K.83 Chain K: D.80 Ligands: CD.126 Ligand excluded by PLIP CL.144: 3 residues within 4Å: Chain E: K.83 Chain L: D.80 Ligands: CD.138 Ligand excluded by PLIP CL.156: 3 residues within 4Å: Chain M: D.80 Chain S: K.83 Ligands: CD.150 Ligand excluded by PLIP CL.168: 3 residues within 4Å: Chain N: D.80 Chain R: K.83 Ligands: CD.162 Ligand excluded by PLIP CL.180: 3 residues within 4Å: Chain O: D.80 Chain Q: K.83 Ligands: CD.174 Ligand excluded by PLIP CL.192: 3 residues within 4Å: Chain P: D.80 Chain T: K.83 Ligands: CD.186 Ligand excluded by PLIP CL.204: 3 residues within 4Å: Chain O: K.83 Chain Q: D.80 Ligands: CD.198 Ligand excluded by PLIP CL.216: 3 residues within 4Å: Chain N: K.83 Chain R: D.80 Ligands: CD.210 Ligand excluded by PLIP CL.228: 3 residues within 4Å: Chain M: K.83 Chain S: D.80 Ligands: CD.222 Ligand excluded by PLIP CL.240: 3 residues within 4Å: Chain P: K.83 Chain T: D.80 Ligands: CD.234 Ligand excluded by PLIP CL.252: 3 residues within 4Å: Chain B: K.83 Chain U: D.80 Ligands: CD.246 Ligand excluded by PLIP CL.264: 3 residues within 4Å: Chain C: K.83 Chain V: D.80 Ligands: CD.258 Ligand excluded by PLIP CL.276: 3 residues within 4Å: Chain D: K.83 Chain W: D.80 Ligands: CD.270 Ligand excluded by PLIP CL.288: 3 residues within 4Å: Chain A: K.83 Chain X: D.80 Ligands: CD.282 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maity, B. et al., Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal. Cryst.Growth Des. (2023)

Release Date

2023-05-03

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
X

C
X

D
X

E
X

F
X

G
X

H
X

I
X

J
X

K
X

L
X

M
X

N
X

O
X

P
X

Q
X

R
X

S
X

T
X

U
X

V
X

W
X

X
X

Ferritin light chain

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