- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x CD: CADMIUM ION(Non-covalent)
- 24 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 4 residues within 4Å:- Chain A: D.80
- Chain X: Q.82
- Ligands: CD.1, CD.4
Ligand excluded by PLIPCL.13: 4 residues within 4Å:- Chain B: D.80
- Chain U: Q.82
- Ligands: CD.9, CD.12
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain C: D.80
- Chain V: Q.82
- Ligands: CD.17, CD.20
Ligand excluded by PLIPCL.29: 4 residues within 4Å:- Chain D: D.80
- Chain W: Q.82
- Ligands: CD.25, CD.28
Ligand excluded by PLIPCL.37: 4 residues within 4Å:- Chain E: D.80
- Chain L: Q.82
- Ligands: CD.33, CD.36
Ligand excluded by PLIPCL.45: 4 residues within 4Å:- Chain F: D.80
- Chain I: Q.82
- Ligands: CD.41, CD.44
Ligand excluded by PLIPCL.53: 4 residues within 4Å:- Chain G: D.80
- Chain J: Q.82
- Ligands: CD.49, CD.52
Ligand excluded by PLIPCL.61: 4 residues within 4Å:- Chain H: D.80
- Chain K: Q.82
- Ligands: CD.57, CD.60
Ligand excluded by PLIPCL.69: 4 residues within 4Å:- Chain F: Q.82
- Chain I: D.80
- Ligands: CD.65, CD.68
Ligand excluded by PLIPCL.77: 4 residues within 4Å:- Chain G: Q.82
- Chain J: D.80
- Ligands: CD.73, CD.76
Ligand excluded by PLIPCL.85: 4 residues within 4Å:- Chain H: Q.82
- Chain K: D.80
- Ligands: CD.81, CD.84
Ligand excluded by PLIPCL.93: 4 residues within 4Å:- Chain E: Q.82
- Chain L: D.80
- Ligands: CD.89, CD.92
Ligand excluded by PLIPCL.101: 4 residues within 4Å:- Chain M: D.80
- Chain S: Q.82
- Ligands: CD.97, CD.100
Ligand excluded by PLIPCL.109: 4 residues within 4Å:- Chain N: D.80
- Chain R: Q.82
- Ligands: CD.105, CD.108
Ligand excluded by PLIPCL.117: 4 residues within 4Å:- Chain O: D.80
- Chain Q: Q.82
- Ligands: CD.113, CD.116
Ligand excluded by PLIPCL.125: 4 residues within 4Å:- Chain P: D.80
- Chain T: Q.82
- Ligands: CD.121, CD.124
Ligand excluded by PLIPCL.133: 4 residues within 4Å:- Chain O: Q.82
- Chain Q: D.80
- Ligands: CD.129, CD.132
Ligand excluded by PLIPCL.141: 4 residues within 4Å:- Chain N: Q.82
- Chain R: D.80
- Ligands: CD.137, CD.140
Ligand excluded by PLIPCL.149: 4 residues within 4Å:- Chain M: Q.82
- Chain S: D.80
- Ligands: CD.145, CD.148
Ligand excluded by PLIPCL.157: 4 residues within 4Å:- Chain P: Q.82
- Chain T: D.80
- Ligands: CD.153, CD.156
Ligand excluded by PLIPCL.165: 4 residues within 4Å:- Chain B: Q.82
- Chain U: D.80
- Ligands: CD.161, CD.164
Ligand excluded by PLIPCL.173: 4 residues within 4Å:- Chain C: Q.82
- Chain V: D.80
- Ligands: CD.169, CD.172
Ligand excluded by PLIPCL.181: 4 residues within 4Å:- Chain D: Q.82
- Chain W: D.80
- Ligands: CD.177, CD.180
Ligand excluded by PLIPCL.189: 4 residues within 4Å:- Chain A: Q.82
- Chain X: D.80
- Ligands: CD.185, CD.188
Ligand excluded by PLIP- 48 x SO4: SULFATE ION(Non-functional Binders)
SO4.6: 2 residues within 4Å:- Chain A: Q.6, N.7
Ligand excluded by PLIPSO4.7: 6 residues within 4Å:- Chain A: L.24, S.27, Y.28, R.59
- Chain X: L.24
- Ligands: SO4.191
Ligand excluded by PLIPSO4.14: 2 residues within 4Å:- Chain B: Q.6, N.7
Ligand excluded by PLIPSO4.15: 6 residues within 4Å:- Chain B: L.24, S.27, Y.28, R.59
- Chain U: L.24
- Ligands: SO4.167
Ligand excluded by PLIPSO4.22: 2 residues within 4Å:- Chain C: Q.6, N.7
Ligand excluded by PLIPSO4.23: 6 residues within 4Å:- Chain C: L.24, S.27, Y.28, R.59
- Chain V: L.24
- Ligands: SO4.175
Ligand excluded by PLIPSO4.30: 2 residues within 4Å:- Chain D: Q.6, N.7
Ligand excluded by PLIPSO4.31: 6 residues within 4Å:- Chain D: L.24, S.27, Y.28, R.59
- Chain W: L.24
- Ligands: SO4.183
Ligand excluded by PLIPSO4.38: 2 residues within 4Å:- Chain E: Q.6, N.7
Ligand excluded by PLIPSO4.39: 6 residues within 4Å:- Chain E: L.24, S.27, Y.28, R.59
- Chain L: L.24
- Ligands: SO4.95
Ligand excluded by PLIPSO4.46: 2 residues within 4Å:- Chain F: Q.6, N.7
Ligand excluded by PLIPSO4.47: 6 residues within 4Å:- Chain F: L.24, S.27, Y.28, R.59
- Chain I: L.24
- Ligands: SO4.71
Ligand excluded by PLIPSO4.54: 2 residues within 4Å:- Chain G: Q.6, N.7
Ligand excluded by PLIPSO4.55: 6 residues within 4Å:- Chain G: L.24, S.27, Y.28, R.59
- Chain J: L.24
- Ligands: SO4.79
Ligand excluded by PLIPSO4.62: 2 residues within 4Å:- Chain H: Q.6, N.7
Ligand excluded by PLIPSO4.63: 6 residues within 4Å:- Chain H: L.24, S.27, Y.28, R.59
- Chain K: L.24
- Ligands: SO4.87
Ligand excluded by PLIPSO4.70: 2 residues within 4Å:- Chain I: Q.6, N.7
Ligand excluded by PLIPSO4.71: 6 residues within 4Å:- Chain F: L.24
- Chain I: L.24, S.27, Y.28, R.59
- Ligands: SO4.47
Ligand excluded by PLIPSO4.78: 2 residues within 4Å:- Chain J: Q.6, N.7
Ligand excluded by PLIPSO4.79: 6 residues within 4Å:- Chain G: L.24
- Chain J: L.24, S.27, Y.28, R.59
- Ligands: SO4.55
Ligand excluded by PLIPSO4.86: 2 residues within 4Å:- Chain K: Q.6, N.7
Ligand excluded by PLIPSO4.87: 6 residues within 4Å:- Chain H: L.24
- Chain K: L.24, S.27, Y.28, R.59
- Ligands: SO4.63
Ligand excluded by PLIPSO4.94: 2 residues within 4Å:- Chain L: Q.6, N.7
Ligand excluded by PLIPSO4.95: 6 residues within 4Å:- Chain E: L.24
- Chain L: L.24, S.27, Y.28, R.59
- Ligands: SO4.39
Ligand excluded by PLIPSO4.102: 2 residues within 4Å:- Chain M: Q.6, N.7
Ligand excluded by PLIPSO4.103: 6 residues within 4Å:- Chain M: L.24, S.27, Y.28, R.59
- Chain S: L.24
- Ligands: SO4.151
Ligand excluded by PLIPSO4.110: 2 residues within 4Å:- Chain N: Q.6, N.7
Ligand excluded by PLIPSO4.111: 6 residues within 4Å:- Chain N: L.24, S.27, Y.28, R.59
- Chain R: L.24
- Ligands: SO4.143
Ligand excluded by PLIPSO4.118: 2 residues within 4Å:- Chain O: Q.6, N.7
Ligand excluded by PLIPSO4.119: 6 residues within 4Å:- Chain O: L.24, S.27, Y.28, R.59
- Chain Q: L.24
- Ligands: SO4.135
Ligand excluded by PLIPSO4.126: 2 residues within 4Å:- Chain P: Q.6, N.7
Ligand excluded by PLIPSO4.127: 6 residues within 4Å:- Chain P: L.24, S.27, Y.28, R.59
- Chain T: L.24
- Ligands: SO4.159
Ligand excluded by PLIPSO4.134: 2 residues within 4Å:- Chain Q: Q.6, N.7
Ligand excluded by PLIPSO4.135: 6 residues within 4Å:- Chain O: L.24
- Chain Q: L.24, S.27, Y.28, R.59
- Ligands: SO4.119
Ligand excluded by PLIPSO4.142: 2 residues within 4Å:- Chain R: Q.6, N.7
Ligand excluded by PLIPSO4.143: 6 residues within 4Å:- Chain N: L.24
- Chain R: L.24, S.27, Y.28, R.59
- Ligands: SO4.111
Ligand excluded by PLIPSO4.150: 2 residues within 4Å:- Chain S: Q.6, N.7
Ligand excluded by PLIPSO4.151: 6 residues within 4Å:- Chain M: L.24
- Chain S: L.24, S.27, Y.28, R.59
- Ligands: SO4.103
Ligand excluded by PLIPSO4.158: 2 residues within 4Å:- Chain T: Q.6, N.7
Ligand excluded by PLIPSO4.159: 6 residues within 4Å:- Chain P: L.24
- Chain T: L.24, S.27, Y.28, R.59
- Ligands: SO4.127
Ligand excluded by PLIPSO4.166: 2 residues within 4Å:- Chain U: Q.6, N.7
Ligand excluded by PLIPSO4.167: 6 residues within 4Å:- Chain B: L.24
- Chain U: L.24, S.27, Y.28, R.59
- Ligands: SO4.15
Ligand excluded by PLIPSO4.174: 2 residues within 4Å:- Chain V: Q.6, N.7
Ligand excluded by PLIPSO4.175: 6 residues within 4Å:- Chain C: L.24
- Chain V: L.24, S.27, Y.28, R.59
- Ligands: SO4.23
Ligand excluded by PLIPSO4.182: 2 residues within 4Å:- Chain W: Q.6, N.7
Ligand excluded by PLIPSO4.183: 6 residues within 4Å:- Chain D: L.24
- Chain W: L.24, S.27, Y.28, R.59
- Ligands: SO4.31
Ligand excluded by PLIPSO4.190: 2 residues within 4Å:- Chain X: Q.6, N.7
Ligand excluded by PLIPSO4.191: 6 residues within 4Å:- Chain A: L.24
- Chain X: L.24, S.27, Y.28, R.59
- Ligands: SO4.7
Ligand excluded by PLIP- 24 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.8: 6 residues within 4Å:- Chain A: Y.36, V.42, G.90, T.91, E.163
- Chain G: R.153
Ligand excluded by PLIPEDO.16: 6 residues within 4Å:- Chain B: Y.36, V.42, G.90, T.91, E.163
- Chain H: R.153
Ligand excluded by PLIPEDO.24: 6 residues within 4Å:- Chain C: Y.36, V.42, G.90, T.91, E.163
- Chain F: R.153
Ligand excluded by PLIPEDO.32: 6 residues within 4Å:- Chain D: Y.36, V.42, G.90, T.91, E.163
- Chain E: R.153
Ligand excluded by PLIPEDO.40: 6 residues within 4Å:- Chain C: R.153
- Chain E: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.48: 6 residues within 4Å:- Chain D: R.153
- Chain F: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.56: 6 residues within 4Å:- Chain B: R.153
- Chain G: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.64: 6 residues within 4Å:- Chain A: R.153
- Chain H: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.72: 6 residues within 4Å:- Chain I: Y.36, V.42, G.90, T.91, E.163
- Chain N: R.153
Ligand excluded by PLIPEDO.80: 6 residues within 4Å:- Chain J: Y.36, V.42, G.90, T.91, E.163
- Chain M: R.153
Ligand excluded by PLIPEDO.88: 6 residues within 4Å:- Chain K: Y.36, V.42, G.90, T.91, E.163
- Chain O: R.153
Ligand excluded by PLIPEDO.96: 6 residues within 4Å:- Chain L: Y.36, V.42, G.90, T.91, E.163
- Chain P: R.153
Ligand excluded by PLIPEDO.104: 6 residues within 4Å:- Chain I: R.153
- Chain M: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.112: 6 residues within 4Å:- Chain J: R.153
- Chain N: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.120: 6 residues within 4Å:- Chain L: R.153
- Chain O: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.128: 6 residues within 4Å:- Chain K: R.153
- Chain P: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.136: 6 residues within 4Å:- Chain Q: Y.36, V.42, G.90, T.91, E.163
- Chain U: R.153
Ligand excluded by PLIPEDO.144: 6 residues within 4Å:- Chain R: Y.36, V.42, G.90, T.91, E.163
- Chain V: R.153
Ligand excluded by PLIPEDO.152: 6 residues within 4Å:- Chain S: Y.36, V.42, G.90, T.91, E.163
- Chain X: R.153
Ligand excluded by PLIPEDO.160: 6 residues within 4Å:- Chain T: Y.36, V.42, G.90, T.91, E.163
- Chain W: R.153
Ligand excluded by PLIPEDO.168: 6 residues within 4Å:- Chain R: R.153
- Chain U: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.176: 6 residues within 4Å:- Chain Q: R.153
- Chain V: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.184: 6 residues within 4Å:- Chain S: R.153
- Chain W: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.192: 6 residues within 4Å:- Chain T: R.153
- Chain X: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, B. et al., Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal. Cryst.Growth Des. (2023)
- Release Date
- 2023-05-03
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
XC
XD
XE
XF
XG
XH
XI
XJ
XK
XL
XM
XN
XO
XP
XQ
XR
XS
XT
XU
XV
XW
XX
X
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-24-mer
- Ligands
- 96 x CD: CADMIUM ION(Non-covalent)
- 24 x CL: CHLORIDE ION(Non-functional Binders)
- 48 x SO4: SULFATE ION(Non-functional Binders)
- 24 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Maity, B. et al., Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal. Cryst.Growth Des. (2023)
- Release Date
- 2023-05-03
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
XC
XD
XE
XF
XG
XH
XI
XJ
XK
XL
XM
XN
XO
XP
XQ
XR
XS
XT
XU
XV
XW
XX
X