SMTL ID : 8j62.1

Cryo-EM structure of APOBEC3G-Vif complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-4-4-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.57, C.88, C.91 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.57, A:C.88, A:C.91 ZN.2: 3 residues within 4Å: Chain G: H.57, C.88, C.91 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:H.57, G:C.88, G:C.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kouno, T. et al., Structural insights into RNA bridging between HIV-1 Vif and antiviral factor APOBEC3G. Nat Commun (2023)

Release Date

2023-07-19

Peptides

APOBEC3G: AG
Viral infectivity factor: BDHJ
Core binding factor beta: CEIK

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

G
B

B
C

D
E

H
G

J
I

C
D

E
F

I
H

K
J

APOBEC3G

Viral infectivity factor

Core binding factor beta

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