SMTL ID : 8jcu.1

Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495 (dimerization mode I)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x Z99: 2-[(1S,2S)-2-carboxycyclopropyl]-3-(9H-xanthen-9-yl)-D-alanine(Non-covalent)

Z99.1: 14 residues within 4Å: Chain A: R.49, R.53, S.135, Y.136, S.137, A.158, S.159, T.160, S.161, D.180, D.207, Y.208, R.263, K.369 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:D.207, A:R.263 Hydrogen bonds: A:S.137, A:T.160, A:T.160, A:T.160, A:S.161, A:K.369 Salt bridges: A:R.49, A:R.53, A:K.369 pi-Stacking: A:Y.208 Z99.4: 14 residues within 4Å: Chain B: R.73, R.77, S.158, Y.159, S.160, A.181, S.182, T.183, S.184, D.203, D.230, Y.231, R.286, K.398 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:R.286 Hydrogen bonds: B:S.160, B:T.183, B:T.183, B:T.183, B:S.184 Salt bridges: B:R.73, B:R.77, B:K.398 pi-Stacking: B:Y.231

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: F.193, F.194, N.195 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.193 NAG.3: 3 residues within 4Å: Chain B: F.216, N.218, S.512 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Structural insights into dimerization and activation of the mGlu2-mGlu3 and mGlu2-mGlu4 heterodimers. Cell Res. (2023)

Release Date

2023-06-21

Peptides

Metabotropic glutamate receptor 2,Peptidyl-prolyl cis-trans isomerase FKBP1A: A
Metabotropic glutamate receptor 3,Serine/threonine-protein kinase mTOR: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
2

B
3

Membrane

We predict this structure to be a membrane protein.
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Metabotropic glutamate receptor 2,Peptidyl-prolyl cis-trans isomerase FKBP1A

Metabotropic glutamate receptor 3,Serine/threonine-protein kinase mTOR

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