SMTL ID : 8jvi.1

Structure of human TRPV4 with antagonist A2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x F9M: [6-[[4-(2,4-dimethyl-1,3-thiazol-5-yl)-1,3-thiazol-2-yl]amino]pyridin-3-yl]-[(1~{S},5~{R})-3-[5-(trifluoromethyl)pyrimidin-2-yl]-3,8-diazabicyclo[3.2.1]octan-8-yl]methanone(Non-covalent)

F9M.1: 10 residues within 4Å: Chain A: K.465, V.469, S.470, N.474, Y.591, D.743, I.744, S.747, F.748, F.756 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.591, A:F.748, A:F.756 Hydrogen bonds: A:N.474, A:N.474 F9M.2: 10 residues within 4Å: Chain B: V.469, S.470, N.474, D.546, Y.591, D.743, I.744, S.747, F.748, F.756 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.748, B:F.748, B:F.756 F9M.3: 10 residues within 4Å: Chain C: K.465, V.469, S.470, N.474, Y.591, D.743, I.744, S.747, F.748, F.756 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:Y.591, C:F.748, C:F.756 Hydrogen bonds: C:N.474, C:N.474 F9M.4: 10 residues within 4Å: Chain D: V.469, S.470, N.474, D.546, Y.591, D.743, I.744, S.747, F.748, F.756 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:F.748, D:F.748, D:F.756

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, J. et al., Structural Pharmacology of TRPV4 Antagonists. Adv Sci (2024)

Release Date

2024-05-08

Peptides

Transient receptor potential cation channel subfamily V member 4,3C-GFP: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

D
A

Membrane

We predict this structure to be a membrane protein.
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Transient receptor potential cation channel subfamily V member 4,3C-GFP

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