SMTL ID : 8jyb.1

Crystal Structure of Intracellular B30.2 Domain of VpBTN3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.127, L.129, R.133, R.184 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.133, A:R.184, A:R.184, A:R.184 Salt bridges: A:R.127, A:R.133, A:R.184 SO4.2: 4 residues within 4Å: Chain A: K.108, D.131, P.132, R.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.133 Salt bridges: A:K.108 SO4.3: 3 residues within 4Å: Chain A: Q.98, N.100, S.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.98, A:N.100, A:S.176 Water bridges: A:S.176 SO4.4: 4 residues within 4Å: Chain B: R.127, L.129, R.133, R.184 6 PLIP interactions: 6 interactions with chain B Water bridges: B:R.133, B:R.133, B:R.184 Salt bridges: B:R.127, B:R.133, B:R.184 SO4.5: 3 residues within 4Å: Chain B: Q.98, N.100, S.176 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.98, B:N.100, B:S.176 SO4.6: 3 residues within 4Å: Chain B: K.108, P.132, R.133 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.133 Salt bridges: B:K.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuan, L. et al., Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells. Nature (2023)

Release Date

2023-09-13

Peptides

Butyrophylin 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Butyrophylin 3

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