SMTL ID : 8k3j.1

Structure of human CNTN2 immunoglobulin domains 1-6 homo-dimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 2 residues within 4Å: Chain A: F.459, N.468 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA-MAN.3: 2 residues within 4Å: Chain B: F.459, N.468 No protein-ligand interaction detected (PLIP)

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 3 residues within 4Å: Chain A: N.431, V.437, P.439 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain B: N.431, T.436, V.437, P.439 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 3 residues within 4Å: Chain A: M.45, N.46, A.76 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.46 NAG.6: 1 residues within 4Å: Chain A: N.447 No protein-ligand interaction detected (PLIP) NAG.7: 4 residues within 4Å: Chain B: M.45, N.46, A.76, G.77 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.46 NAG.8: 1 residues within 4Å: Chain B: N.447 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.Z., Structure of human CNTN2 immunoglobulin domains 1-6 homo-dimer. To Be Published

Release Date

2024-07-17

Peptides

Contactin-2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Contactin-2

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