SMTL ID : 8k93.1

CryoEM structure of LonC protease S582A open hexamer with lysozyme

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

4 x TS6: Monothiophosphate(Non-covalent)

TS6.1: 6 residues within 4Å: Chain B: S.56, L.57, G.58, K.59, H.60, V.438 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:S.56, B:L.57, B:G.58, B:K.59, B:K.59, B:K.59, B:H.60, B:H.60, C:E.378 TS6.2: 7 residues within 4Å: Chain C: S.56, L.57, G.58, K.59, H.60, V.438 Chain D: E.378 9 PLIP interactions: 1 interactions with chain D, 8 interactions with chain C Hydrogen bonds: D:E.378, C:S.56, C:L.57, C:G.58, C:K.59, C:K.59, C:K.59, C:H.60, C:H.60 TS6.3: 5 residues within 4Å: Chain D: S.56, L.57, G.58, K.59, H.60 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:S.56, D:L.57, D:G.58, D:K.59, D:K.59, D:K.59, D:H.60, D:H.60 TS6.4: 6 residues within 4Å: Chain E: S.56, L.57, G.58, K.59, H.60 Chain F: E.378 9 PLIP interactions: 8 interactions with chain E, 1 interactions with chain F Hydrogen bonds: E:S.56, E:L.57, E:G.58, E:K.59, E:K.59, E:K.59, E:H.60, E:H.60, F:E.378

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, M. et al., Bifurcated assembly pathway and dual function of a Lon-like protease revealed by cryo-EM Analysis. Fundam Res (2024)

Release Date

2024-08-07

Peptides

Endopeptidase La: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Endopeptidase La

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