SMTL ID : 8khm.1

Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 5 residues within 4Å: Chain A: K.273, L.275, S.283, L.284, N.286 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.273 Water bridges: A:K.273, A:N.286

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: P.49, D.50, Y.51, Y.160, H.165, S.234 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.50, A:Y.51, A:Y.160, A:H.165 Water bridges: A:F.236 GOL.3: 2 residues within 4Å: Chain A: A.35, S.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, Y. et al., Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D. Sci Rep (2023)

Release Date

2024-01-24

Peptides

Methionine aminopeptidase 1D, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine aminopeptidase 1D, mitochondrial

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