- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.1: 1 residues within 4Å:- Chain A: N.376
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.376
NAG.2: 1 residues within 4Å:- Chain A: N.120
No protein-ligand interaction detected (PLIP)NAG.3: 2 residues within 4Å:- Chain A: R.83, N.176
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.176
NAG.4: 1 residues within 4Å:- Chain A: N.490
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.490
NAG.7: 2 residues within 4Å:- Chain B: S.374, N.376
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.376
NAG.8: 1 residues within 4Å:- Chain B: N.120
No protein-ligand interaction detected (PLIP)NAG.9: 2 residues within 4Å:- Chain B: R.83, N.176
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.83, B:N.176
NAG.10: 1 residues within 4Å:- Chain B: N.490
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.490
NAG.13: 2 residues within 4Å:- Chain C: D.136, N.137
No protein-ligand interaction detected (PLIP)- 8 x CA: CALCIUM ION(Non-covalent)
CA.5: 6 residues within 4Å:- Chain A: D.64, D.184, N.186, L.188, N.192, E.193
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.184, A:D.184, A:L.188, A:E.193
CA.6: 6 residues within 4Å:- Chain A: D.412, N.539, N.541, N.543, D.546, D.547
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.412, A:D.412, A:N.543, A:D.546
CA.11: 6 residues within 4Å:- Chain B: D.64, D.184, N.186, L.188, N.192, E.193
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.64, B:D.184, B:D.184, B:L.188, B:E.193
CA.12: 6 residues within 4Å:- Chain B: D.412, N.539, N.541, N.543, D.546, D.547
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.412, B:D.412, B:N.543, B:D.546, B:D.547
CA.14: 6 residues within 4Å:- Chain C: D.115, N.236, D.238, N.240, N.243, D.244
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:D.238, C:D.238, C:N.240, C:D.244
CA.15: 6 residues within 4Å:- Chain D: D.115, N.236, D.238, N.240, N.243, D.244
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:D.238, D:D.238, D:N.240, D:D.244
CA.16: 5 residues within 4Å:- Chain E: N.13, H.15, D.25, E.27, Y.88
4 PLIP interactions:4 interactions with chain E- Metal complexes: E:H.15, E:D.25, E:E.27, E:Y.88
CA.17: 5 residues within 4Å:- Chain F: N.13, H.15, D.25, E.27, Y.88
5 PLIP interactions:5 interactions with chain F- Metal complexes: F:H.15, F:D.25, F:D.25, F:E.27, F:Y.88
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Khmelnitsky, L. et al., Pulmonary Fibrosis Linked to Impaired Mucin 5B Supramolecular Assembly. To Be Published
- Release Date
- 2024-03-27
- Peptides
- Mucin-5B: AB
Mucin-5B: CD
Mucin-5B: EF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
IF
J
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-mer
- Ligands
- 9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 8 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Khmelnitsky, L. et al., Pulmonary Fibrosis Linked to Impaired Mucin 5B Supramolecular Assembly. To Be Published
- Release Date
- 2024-03-27
- Peptides
- Mucin-5B: AB
Mucin-5B: CD
Mucin-5B: EF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
IF
J