SMTL ID : 8ony.1

Human Methionine Aminopeptidase 2 at the 80S ribosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 5 residues within 4Å: Chain H: D.262, H.331, E.364, E.459 Ligands: CO.2 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:D.262, H:H.331, H:E.364, H:E.459 CO.2: 6 residues within 4Å: Chain H: D.251, D.262, H.331, E.364, E.459 Ligands: CO.1 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:D.262, H:D.262, H:E.364, H:E.459, H:E.459

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klein, M.A. et al., Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome. Nat Commun (2024)

Release Date

2024-02-21

Peptides

60S ribosomal protein L38: B
60S ribosomal protein L26: C
60S ribosomal protein L35: D
60S ribosomal protein L23a: E
60S ribosomal protein L19: F
Methionine aminopeptidase 2: H

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
Lk

C
LY

D
Lh

E
LX

F
LR

H
A

60S ribosomal protein L38

60S ribosomal protein L26

60S ribosomal protein L35

60S ribosomal protein L23a

60S ribosomal protein L19

Methionine aminopeptidase 2

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