SMTL ID : 8ott.1

MYC-MAX bound to a nucleosome at SHL+5.8

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-1-2-1-1-1-mer

Ligands

8 x PTD: PENTANEDIAL(Covalent)

PTD.1: 2 residues within 4Å: Chain A: K.41 Chain B: K.59 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.59, A:K.41 PTD.2: 2 residues within 4Å: Chain A: K.84 Chain E: K.77 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain E Hydrophobic interactions: A:K.84, E:K.77 PTD.3: 2 residues within 4Å: Chain A: K.77 Chain E: K.84 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain A Hydrophobic interactions: E:K.84, A:K.77 PTD.4: 3 residues within 4Å: Chain C: K.29 Chain H: H.51, K.54 2 PLIP interactions: 1 interactions with chain H, 1 interactions with chain C Hydrophobic interactions: H:K.54, C:K.29 PTD.5: 3 residues within 4Å: Chain D: I.8, K.12, K.15 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:I.8, D:K.12, D:K.15 PTD.6: 3 residues within 4Å: Chain D: H.51, K.54 Chain G: K.27 2 PLIP interactions: 1 interactions with chain G, 1 interactions with chain D Hydrophobic interactions: G:K.27, D:K.54 PTD.7: 2 residues within 4Å: Chain E: K.41 Chain F: K.59 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain F Hydrophobic interactions: E:K.41, F:K.59 PTD.8: 4 residues within 4Å: Chain H: I.8, Y.11, K.12, K.15 4 PLIP interactions: 4 interactions with chain H Hydrophobic interactions: H:I.8, H:Y.11, H:K.12, H:K.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michael, A.K. et al., Cooperation between bHLH transcription factors and histones for DNA access. Nature (2023)

Release Date

2023-05-24

Peptides

Histone H3.1: AE
Histone H4: BF
Histone H2A type 1-B/E: C
Histone H2B type 1-J: DH
Histone H2A type 1-K: G
Myc proto-oncogene protein: K
Protein max: L

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

B
B

F
F

C
C

D
D

H
H

G
G

K
M

L
N

Histone H3.1

Histone H4

Histone H2A type 1-B/E

Histone H2B type 1-J

Histone H2A type 1-K

Myc proto-oncogene protein

Protein max

Related Entries With Identical Sequence