SMTL ID : 8otu.1 (1 other biounit)

The crystal structure of PET44, a PETase enzyme from Alkalilimnicola ehrlichii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: S.70, L.71, V.72, G.74, F.75, G.76 Ligands: EDO.15 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.126 Water bridges: A:G.74

16 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: A.56, D.57 Ligand excluded by PLIP EDO.3: 7 residues within 4Å: Chain A: E.51, K.265, Y.266, F.284, P.288, H.290 Ligands: EDO.12 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: E.216, E.244, S.297, E.298 Ligand excluded by PLIP EDO.5: 2 residues within 4Å: Chain A: P.47, D.48 Ligand excluded by PLIP EDO.6: 3 residues within 4Å: Chain A: T.62, I.63, V.84 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: Y.99, S.172, M.173, W.196, I.220 Ligand excluded by PLIP EDO.8: 7 residues within 4Å: Chain A: E.140, L.143, E.144, L.166, L.181, G.186, I.187 Ligand excluded by PLIP EDO.9: 5 residues within 4Å: Chain A: Q.188, T.208, P.209, H.274, Q.277 Ligand excluded by PLIP EDO.10: 7 residues within 4Å: Chain A: Y.231, N.232, I.234, P.235, S.236, K.240, T.302 Ligand excluded by PLIP EDO.11: 8 residues within 4Å: Chain A: L.285, C.286, G.287, P.288, H.290, H.299, S.301, C.303 Ligand excluded by PLIP EDO.12: 8 residues within 4Å: Chain A: Y.266, P.288, N.289, H.290, R.292, D.293 Ligands: EDO.3, EDO.14 Ligand excluded by PLIP EDO.13: 2 residues within 4Å: Chain A: R.217, S.219 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain A: G.287, P.288, N.289 Ligands: EDO.12 Ligand excluded by PLIP EDO.15: 6 residues within 4Å: Chain A: S.70, F.75, G.76, T.125, N.126 Ligands: NA.1 Ligand excluded by PLIP EDO.16: 3 residues within 4Å: Chain A: D.184, D.185, G.186 Ligand excluded by PLIP EDO.17: 9 residues within 4Å: Chain A: S.66, N.67, V.68, I.80, Y.145, Q.149, S.155, P.156, I.157 Ligand excluded by PLIP

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.18: 6 residues within 4Å: Chain A: P.132, P.133, R.180, W.196, N.197, T.198 Ligand excluded by PLIP CL.19: 5 residues within 4Å: Chain A: D.218, S.219, I.220, N.249, H.250 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Costanzi, E. et al., The crystal structure of PET44, a PETase enzyme from Alkalilimnicola ehrlichii. To Be Published

Release Date

2024-11-06

Peptides

Dienelactone hydrolase domain-containing protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dienelactone hydrolase domain-containing protein

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