SMTL ID : 8ouv.2 (1 other biounit)

Crystal structure of D1228V c-MET bound by compound 15

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.77, L.188, A.189 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: L.208, P.209, V.210, K.211, W.212 Ligand excluded by PLIP

1 x W3R: 5-(1H-indazol-7-yl)-1-[(1S)-1-phenylethyl]pyrimidine-2,4-dione(Non-covalent)

W3R.3: 19 residues within 4Å: Chain A: K.73, F.87, E.90, G.91, M.94, F.97, V.102, L.103, L.105, I.108, V.118, L.120, F.163, H.165, V.183, A.184, D.185, A.189, R.190 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:F.87, A:F.87, A:F.97, A:V.102, A:L.105, A:L.105, A:I.108, A:V.118, A:V.118, A:F.163, A:F.163, A:D.185 Hydrogen bonds: A:K.73, A:D.185, A:D.185, A:R.190 Water bridges: A:K.73, A:D.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michaelides, I.N. et al., Discovery and Optimization of the First ATP Competitive Type-III c-MET Inhibitor. J.Med.Chem. (2023)

Release Date

2023-07-05

Peptides

Hepatocyte growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Hepatocyte growth factor receptor

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