SMTL ID : 8pwk.1

human HINT1 in complex with compound AT8003

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x I0H: [(2~{R},3~{R},4~{R},5~{R})-5-[2-azanyl-6-(methylamino)purin-9-yl]-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate(Non-covalent)

I0H.1: 10 residues within 4Å: Chain A: I.44, S.45, N.99, G.105, Q.106, S.107, V.108, H.112, H.114 Chain B: W.123 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.45, A:N.99, A:S.107, A:V.108 Water bridges: A:D.43, A:V.97, A:N.99 Salt bridges: A:H.112, A:H.114

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain B: T.17, G.20, H.59, H.110 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.17, B:T.17, B:G.20, B:H.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chazot, A. et al., The activation cascade of the broad-spectrum antiviral bemnifosbuvir characterized at atomic resolution. Plos Biol. (2024)

Release Date

2024-07-31

Peptides

Histidine triad nucleotide-binding protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histidine triad nucleotide-binding protein 1

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