SMTL ID : 8q3j.1 (1 other biounit)

Crystal structure of mIL-38 in complex with a neutralizing Fab e04 fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: Y.21, T.22, S.38, E.40, K.41, Q.62 Chain B: S.34, R.69 10 PLIP interactions: 6 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:T.22, A:T.22, A:T.22, A:S.38, A:Q.62, B:S.34, B:S.34, B:S.34 Salt bridges: A:K.41, B:R.69 PO4.2: 4 residues within 4Å: Chain C: T.65, Y.67, T.76, I.77 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:T.65, C:T.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

da Silva, P. et al., Neutralizing IL-38 activates gamma delta T cell-dependent antitumor immunity and sensitizes for chemotherapy. J Immunother Cancer (2024)

Release Date

2024-08-14

Peptides

Interleukin-1 family member 10: A
Fab e04 Light Chain (e04 LC): B
Fab e04 Heavy Chain (e04 HC): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Interleukin-1 family member 10

Fab e04 Light Chain (e04 LC)

Fab e04 Heavy Chain (e04 HC)

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