SMTL ID : 8q3j.2 (1 other biounit)

Crystal structure of mIL-38 in complex with a neutralizing Fab e04 fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: T.22, R.23, N.24 Chain B: S.34, Y.35, S.53, A.54 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.53, B:S.53, A:T.22, A:T.22, A:N.24 PO4.2: 3 residues within 4Å: Chain C: T.65, Y.67, I.77 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:T.65, C:Y.67 Water bridges: C:T.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

da Silva, P. et al., Neutralizing IL-38 activates gamma delta T cell-dependent antitumor immunity and sensitizes for chemotherapy. J Immunother Cancer (2024)

Release Date

2024-08-14

Peptides

Interleukin-1 family member 10: A
Fab e04 Light Chain (e04 LC): B
Fab e04 Heavy Chain (e04 HC): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Interleukin-1 family member 10

Fab e04 Light Chain (e04 LC)

Fab e04 Heavy Chain (e04 HC)

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